RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 THAP6Q8TBB0 222 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 SLC35E1Q96K37 410 aa9.8□□□□□ -0.84
SHMT2-227ENST00000557269 TRRAPQ9Y4A5 3859 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 IGHV3OR16-8A0A075B7F1 116 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 NUPL2O15504 423 aaKnown RBP9.79□□□□□ -0.84
SHMT2-227ENST00000557269 EDN2P20800 178 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 OR10J1P30954 320 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 SLC38A11Q08AI6 406 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 IL34Q6ZMJ4 242 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 GPHB5Q86YW7 130 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 WFDC9Q8NEX5 89 aa9.79□□□□□ -0.84
SHMT2-227ENST00000557269 RCC1LQ96I51 464 aaKnown RBP9.79□□□□□ -0.84
SHMT2-227ENST00000557269 GAR1Q9NY12 217 aaKnown RBP9.79□□□□□ -0.84
SHMT2-227ENST00000557269 WNK1Q9H4A3 2382 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 SMCO3A2RU48 225 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 RPL12P30050 165 aaKnown RBP9.78□□□□□ -0.84
SHMT2-227ENST00000557269 ZNF90Q03938 601 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 CD300CQ08708 224 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 FGL1Q08830 312 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 TMEM182Q6ZP80 229 aaPredicted RBP9.78□□□□□ -0.84
SHMT2-227ENST00000557269 STX12Q86Y82 276 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 C1QL4Q86Z23 238 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 THAP8Q8NA92 274 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 OR11H4Q8NGC9 324 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 SLC25A31Q9H0C2 315 aa9.78□□□□□ -0.84
SHMT2-227ENST00000557269 TRAV30A0A087WSZ9 112 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 FXYD6-FXYD2A0A087WZ82 144 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 ZNF320A2RRD8 509 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 OVOL1O14753 267 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 S100A11P31949 105 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 AKR1C1Q04828 323 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 ADAMTSL5Q6ZMM2 481 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 TMEM144Q7Z5S9 345 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 OR1S2Q8NGQ3 325 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 OR5C1Q8NGR4 320 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 GGACTQ9BVM4 153 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 WFDC1Q9HC57 220 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
SHMT2-227ENST00000557269 RNF222A6NCQ9 220 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 FNDC10F2Z333 226 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 LGALS9O00182 355 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 NDUFA4O00483 81 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 ZNF207O43670 478 aaKnown RBP9.76□□□□□ -0.85
SHMT2-227ENST00000557269 IGLL1P15814 213 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 CD33P20138 364 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 GATA2P23769 480 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-227ENST00000557269 YPEL3P61236 119 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-227ENST00000557269 RELQ04864 619 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-227ENST00000557269 BAXQ07812 192 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 CLINT1Q14677 625 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 TM4SF20Q53R12 229 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 ZNF600Q6ZNG1 722 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 REC114Q7Z4M0 266 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 ZNF546Q86UE3 836 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 OR9G4Q8NGQ1 327 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 TMEM190Q8WZ59 177 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 AQP10Q96PS8 301 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 TRGV9Q99603 122 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 C20orf24Q9BUV8 137 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 SMIM3Q9BZL3 60 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 NPVFQ9HCQ7 196 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 TNFSF18Q9UNG2 199 aa9.76□□□□□ -0.85
SHMT2-227ENST00000557269 LSM4Q9Y4Z0 139 aaKnown RBP9.76□□□□□ -0.85
SHMT2-227ENST00000557269 PUS1Q9Y606 427 aaKnown RBP eCLIP9.76□□□□□ -0.85
SHMT2-227ENST00000557269 TMEM213A2RRL7 107 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 YIF1AO95070 293 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 CSN3P07498 182 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 PSG1P11464 419 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 HBG1P69891 147 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 HBG2P69892 147 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 OR2F1Q13607 317 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 FAM106AQ4KMX7 169 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 MGST2Q99735 147 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 TMEM147Q9BVK8 224 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 UQCC1Q9NVA1 299 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 WDR83OSQ9Y284 106 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
SHMT2-227ENST00000557269 UBE2L5PA0A1B0GUS4 154 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 C2orf70A6NJV1 201 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 A8MWP6 167 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 ARPC5O15511 151 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
SHMT2-227ENST00000557269 TOMM40O96008 361 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 RD3LP0DJH9 198 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 ATP6V1FQ16864 119 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 AKAP14Q86UN6 197 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 TCTE3Q8IZS6 198 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 Q8WTZ3 238 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 PKD1L1Q8TDX9 2849 aa9.74□□□□□ -0.85
SHMT2-227ENST00000557269 CMYA5Q8N3K9 4069 aa9.73□□□□□ -0.85
SHMT2-227ENST00000557269 IGHV3-49A0A0A0MS15 119 aa9.73□□□□□ -0.85
SHMT2-227ENST00000557269 WI2-2373I1.2A0A1W2PRP0 233 aa9.73□□□□□ -0.85
SHMT2-227ENST00000557269 SEC14L6B5MCN3 397 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms