RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 NEUROG1Q92886 237 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TNFRSF14Q92956 283 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 ADTRPQ96IZ2 230 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 IMMP1LQ96LU5 166 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 IGF2BP2-AS1Q96M15 143 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 NABP2Q9BQ15 211 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 NDFIP1Q9BT67 221 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 PHF7Q9BWX1 381 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-208ENST00000556956 CXXC4Q9H2H0 198 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 PRNDQ9UKY0 176 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 BOKQ9UMX3 212 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-208ENST00000556956 PSG11Q9UQ72 335 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 TCF19Q9Y242 345 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 FOXA2Q9Y261 457 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-208ENST00000556956 OR51B2Q9Y5P1 312 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 SCN3AQ9NY46 2000 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 DOCK8Q8NF50 2099 aa2.33□□□□□ -2.04
SLIRP-208ENST00000556956 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 MUC21A0A0G2JKD1 596 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 IGHV5-10-1A0A0J9YXX1 117 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 MUC21A0A140T8X8 626 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 TEX50A0A1B0GTY4 177 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 A0A1B0GXF2 115 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 hDV102S1A0JD36 115 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 C7orf71A4D174 169 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 FAM231BA6NCW3 169 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 GAGE12JA6NER3 117 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 C15orf61A6NNL5 157 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 IQCF6A8MYZ5 107 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 J3QR89 54 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 K7EP34 96 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 PEX7O00628 323 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 CHEK1O14757 476 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 COX7A2P2O60397 106 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 ACTL6BO94805 426 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 IGHV3-9P01782 118 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 COX8AP10176 69 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 COX6A1P12074 109 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 DEFA4P12838 97 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 IGFBP2P18065 325 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 GATA2P23769 480 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-208ENST00000556956 GDF1P27539 372 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 OTX2P32243 289 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 BMI1P35226 326 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 CA7P43166 264 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 GPR6P46095 362 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-208ENST00000556956 RIPPLY3P57055 190 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 PLP1P60201 277 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 RPL8P62917 257 aaKnown RBP2.32□□□□□ -2.04
SLIRP-208ENST00000556956 HBBP68871 147 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SLC35B1P78383 322 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 AESQ08117 197 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 HSD52Q0P140 79 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SLAQ13239 276 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 FHL3Q13643 280 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 PSG3Q16557 428 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 C2orf83Q53S99 150 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 MUC21Q5SSG8 566 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 C1orf185Q5T7R7 199 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 C9orf135Q5VTT2 229 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SAMD13Q5VXD3 122 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 CLEC2AQ6UVW9 174 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 FA2HQ7L5A8 372 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SSX8Q7RTT4 187 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 TUSC5Q8IXB3 177 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 MTURNQ8N3F0 131 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SLC25A45Q8N413 288 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SPEM1Q8N4L4 309 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 RNF152Q8N8N0 203 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-208ENST00000556956 STXBP6Q8NFX7 210 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 OR4X2Q8NGF9 303 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 OR9G4Q8NGQ1 327 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 OR1B1Q8NGR6 318 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 OR2K2Q8NGT1 345 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 VSTM2AQ8TAG5 236 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 CACNG8Q8WXS5 425 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 ST6GALNAC6Q969X2 333 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 TMEM186Q96B77 213 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 C5orf30Q96GV9 206 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 SIGMAR1Q99720 223 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 PAXXQ9BUH6 204 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 GFRA4Q9GZZ7 299 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 RPP21Q9H633 154 aaKnown RBP2.32□□□□□ -2.04
SLIRP-208ENST00000556956 OBP2BQ9NPH6 170 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 CLEC5AQ9NY25 188 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 IDI2-AS1Q9NZ38 188 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 MSRB1Q9NZV6 116 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 MDFICQ9P1T7 246 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 ZNF492Q9P255 531 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 B4GALT7Q9UBV7 327 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 JPT1Q9UK76 154 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 AMMECR1Q9Y4X0 333 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-208ENST00000556956 CPAMD8Q8IZJ3 1885 aa2.32□□□□□ -2.04
SLIRP-208ENST00000556956 LRP4O75096 1905 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 CEP192Q8TEP8 1941 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 TRPM6Q9BX84 2022 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 A0A087X0K7 114 aa2.31□□□□□ -2.04
SLIRP-208ENST00000556956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.31□□□□□ -2.04
SLIRP-208ENST00000556956 IGHV3-43A0A0B4J1X8 118 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms