RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ZNF705AQ6ZN79 300 aaPredicted RBP6.43□□□□□ -1.38
HNRNPC-227ENST00000556897 TBC1D26Q86UD7 250 aa6.43□□□□□ -1.38
HNRNPC-227ENST00000556897 TMEM230Q96A57 120 aa6.43□□□□□ -1.38
HNRNPC-227ENST00000556897 NARS2Q96I59 477 aaKnown RBP6.43□□□□□ -1.38
HNRNPC-227ENST00000556897 FAM212BQ9NTI7 297 aaPredicted RBP6.43□□□□□ -1.38
HNRNPC-227ENST00000556897 RAB26Q9ULW5 256 aa6.43□□□□□ -1.38
HNRNPC-227ENST00000556897 HERC1Q15751 4861 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 IGHV3OR16-12A0A075B7B8 117 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 ZNF705FA8MVS1 300 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 H3BMM0 161 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 BOLA2-SMG1P6H3BVE0 249 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 CORTO00230 105 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 IGKV1-17P01599 117 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 ZNF705DP0CH99 300 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 ZNF705BP0CI00 300 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 RNASE2P10153 161 aaKnown RBP6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 HTN3P15516 51 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 HLA-DMAP28067 261 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 S100GP29377 79 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 HRH1P35367 487 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 OPRK1P41145 380 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 SNRPD3P62318 126 aaKnown RBP6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 TIGITQ495A1 244 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 RNF212Q495C1 297 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 KCTD21Q4G0X4 260 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 LYSMD2Q8IV50 215 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 SLC35G3Q8N808 338 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 OR4X1Q8NH49 305 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 GLMPQ8WWB7 406 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 FAM210BQ96KR6 192 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 FNDC4Q9H6D8 234 aaPredicted RBP6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 ANAPC10Q9UM13 185 aa6.42□□□□□ -1.38
HNRNPC-227ENST00000556897 A0A0B4J293 547 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 LOC100506127A0A0U1RQW1 187 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 TMEM189A5PLL7 270 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 INS-IGF2F8WCM5 200 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 SCGB2A1O75556 95 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 ETV6P41212 452 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 AP2S1P53680 142 aaPredicted RBP6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 SUB1P53999 127 aaKnown RBP eCLIP6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 FXYD7P58549 80 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 SMUG1Q53HV7 270 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 FAM222AQ5U5X8 452 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 LPCAT3Q6P1A2 487 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 C16orf54Q6UWD8 224 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 SPARTQ8N0X7 666 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 S100A16Q96FQ6 103 aaKnown RBP6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 NEU1Q99519 415 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 DKK2Q9UBU2 259 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 RSL24D1Q9UHA3 163 aaKnown RBP6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 U3KQE9 123 aa6.41□□□□□ -1.38
HNRNPC-227ENST00000556897 SMIM9A6NGZ8 99 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 IGKV1-5P01602 117 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 IGKV3-20P01619 116 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 HLA-DRB4P13762 266 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 ALDH3B2P48448 385 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 HOXA1P49639 335 aaPredicted RBP6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 TAS2R20P59543 309 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 DEFB1P60022 68 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 GABARAPL2P60520 117 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 TSPAN5P62079 268 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 TMEM69Q5SWH9 247 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 TMEM88Q6PEY1 159 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 Q8N1X5 172 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 FCGR1BQ92637 280 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 PRELID1Q9Y255 219 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 RFNGQ9Y644 331 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 HLA-DRB4X5D2U9 266 aa6.4□□□□□ -1.38
HNRNPC-227ENST00000556897 APOBP04114 4563 aaKnown RBP6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 TRAV30A0A087WSZ9 112 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 TEX48A0A1B0GUV7 120 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 P0C879 139 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 IGLC1P0CG04 106 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 AKR1C2P52895 323 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 DHODHQ02127 395 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 USF2Q15853 346 aaPredicted RBP6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 RGS21Q2M5E4 152 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 GDF5OSQ5U4N7 250 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 LINC00299Q6ZSB3 139 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 Q8WTZ3 238 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 PDCD10Q9BUL8 212 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 ENY2Q9NPA8 101 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 SCRT2Q9NQ03 307 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 RABL2BQ9UNT1 228 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 TMED3Q9Y3Q3 217 aa6.39□□□□□ -1.39
HNRNPC-227ENST00000556897 BUB3O43684 328 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 SCGB1D2O95969 90 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 IL4P05112 153 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 PGAM2P15259 253 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 PI3P19957 117 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 M6PRP20645 277 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 S100A5P33763 92 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 PRSS3P35030 304 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 NKX2-1P43699 371 aaPredicted RBP6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 RND2P52198 227 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 UCP3P55916 312 aa6.38□□□□□ -1.39
HNRNPC-227ENST00000556897 OXA1LQ15070 435 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms