RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 NUTF2P61970 127 aaKnown RBP11.28□□□□□ -0.6
RCCD1-207ENST00000556774 SNRPD3P62318 126 aaKnown RBP11.28□□□□□ -0.6
RCCD1-207ENST00000556774 SP6Q3SY56 376 aa11.28□□□□□ -0.6
RCCD1-207ENST00000556774 OR1S2Q8NGQ3 325 aa11.28□□□□□ -0.6
RCCD1-207ENST00000556774 RNASE11Q8TAA1 199 aaKnown RBP11.28□□□□□ -0.6
RCCD1-207ENST00000556774 ZNF486Q96H40 463 aaPredicted RBP11.28□□□□□ -0.6
RCCD1-207ENST00000556774 COMMD3Q9UBI1 195 aa11.28□□□□□ -0.6
RCCD1-207ENST00000556774 C3orf85A0A1B0GTC6 90 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 SMIM31A0A1B0GVY4 71 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 RPS10-NUDT3A0A1W2PQS6 291 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 ATG12O94817 140 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 ATP6V1G2O95670 118 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 CD74P04233 296 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 OR10J1P30954 320 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
RCCD1-207ENST00000556774 Q6ZR54 194 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 NRN1Q9NPD7 142 aa11.27□□□□□ -0.61
RCCD1-207ENST00000556774 APOA1P02647 267 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 IL4P05112 153 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 AP2S1P53680 142 aaPredicted RBP11.26□□□□□ -0.61
RCCD1-207ENST00000556774 FXYD7P58549 80 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 DHODHQ02127 395 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 PRSS54Q6PEW0 395 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 SIGLEC15Q6ZMC9 328 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 ZNF705AQ6ZN79 300 aaPredicted RBP11.26□□□□□ -0.61
RCCD1-207ENST00000556774 LHFPL1Q86WI0 220 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 Q8WTZ3 238 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 YIPF6Q96EC8 236 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 RRNAD1Q96FB5 475 aaKnown RBP11.26□□□□□ -0.61
RCCD1-207ENST00000556774 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
RCCD1-207ENST00000556774 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 ZNF705FA8MVS1 300 aaPredicted RBP11.25□□□□□ -0.61
RCCD1-207ENST00000556774 IFNA21P01568 189 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
RCCD1-207ENST00000556774 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
RCCD1-207ENST00000556774 SPART-AS1P0CW21 52 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 ELK1P19419 428 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 HTR2BP41595 481 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 DEFB1P60022 68 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 SPCS3P61009 180 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 YPEL3P61236 119 aaPredicted RBP11.25□□□□□ -0.61
RCCD1-207ENST00000556774 RNASE10Q5GAN6 216 aaKnown RBP11.25□□□□□ -0.61
RCCD1-207ENST00000556774 GDF5OSQ5U4N7 250 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 Q6ZRM9 215 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 NEU1Q99519 415 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 COPZ2Q9P299 210 aa11.25□□□□□ -0.61
RCCD1-207ENST00000556774 HPGDSO60760 199 aa11.24□□□□□ -0.61
RCCD1-207ENST00000556774 CD3DP04234 171 aa11.24□□□□□ -0.61
RCCD1-207ENST00000556774 SLC25A4P12235 298 aa11.24□□□□□ -0.61
RCCD1-207ENST00000556774 UCP1P25874 307 aa11.24□□□□□ -0.61
RCCD1-207ENST00000556774 HEYLQ9NQ87 328 aaPredicted RBP11.24□□□□□ -0.61
RCCD1-207ENST00000556774 KLK11Q9UBX7 282 aa11.24□□□□□ -0.61
RCCD1-207ENST00000556774 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 BUB3O43684 328 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 NXPH3O95157 252 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 HTN3P15516 51 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 AARDQ4LEZ3 155 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 C2orf83Q53S99 150 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 FAM222AQ5U5X8 452 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 ARRDC1Q8N5I2 433 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 SLC24A4Q8NFF2 622 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 OR13C8Q8NGS7 320 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 TMEM170AQ8WVE7 144 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 NPIPB3Q92617 1050 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 SEPSECSQ9HD40 501 aaKnown RBP11.23□□□□□ -0.61
RCCD1-207ENST00000556774 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 RFNGQ9Y644 331 aa11.23□□□□□ -0.61
RCCD1-207ENST00000556774 GSTZ1O43708 216 aaPredicted RBP11.22□□□□□ -0.61
RCCD1-207ENST00000556774 TOMM40O96008 361 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 NKX2-1P43699 371 aaPredicted RBP11.22□□□□□ -0.61
RCCD1-207ENST00000556774 NCS1P62166 190 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 OR4D10Q8NGI6 311 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 LHFPL5Q8TAF8 219 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 RNASEH2CQ8TDP1 164 aaKnown RBP11.22□□□□□ -0.61
RCCD1-207ENST00000556774 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 NIPSNAP3BQ9BS92 247 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 CACNG5Q9UF02 275 aa11.22□□□□□ -0.61
RCCD1-207ENST00000556774 TEX48A0A1B0GUV7 120 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 CEBPZOSA8MTT3 80 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 OR5AC1P0C628 307 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 SCGB2B2Q4G0G5 96 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 FAM219AQ8IW50 185 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 ZNF709Q8N972 641 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 OR52E5Q8NH55 327 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 OR52I2Q8NH67 350 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 ZFAND1Q8TCF1 268 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 MARCH1Q8TCQ1 289 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 TMEM222Q9H0R3 208 aa11.21□□□□□ -0.61
RCCD1-207ENST00000556774 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
RCCD1-207ENST00000556774 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.62
RCCD1-207ENST00000556774 FAM25AB3EWG3 89 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms