RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 C9orf106Q8NAJ2 232 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 OR10X1Q8NGY0 326 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 RFESDQ8TAC1 157 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 CMTM2Q8TAZ6 248 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 TMEM37Q8WXS4 190 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 DDB2Q92466 427 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 FLYWCH2Q96CP2 140 aaKnown RBP4.97□□□□□ -1.61
CPSF2-205ENST00000556622 MS4A10Q96PG2 267 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 RNF5Q99942 180 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 SRSF8Q9BRL6 282 aaKnown RBP4.97□□□□□ -1.61
CPSF2-205ENST00000556622 C2orf88Q9BSF0 95 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 NDUFAF3Q9BU61 184 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 IFI27L2Q9H2X8 130 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 DNAJC4Q9NNZ3 241 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 SLC35D1Q9NTN3 355 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 ZNF586Q9NXT0 402 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 SPENQ96T58 3664 aaKnown RBP4.97□□□□□ -1.61
CPSF2-205ENST00000556622 DOCK7Q96N67 2140 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 HCFC1P51610 2035 aa4.97□□□□□ -1.61
CPSF2-205ENST00000556622 CENPEQ02224 2701 aa4.96□□□□□ -1.61
CPSF2-205ENST00000556622 C20orf202A1L168 122 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 DEFB108AA8MXU0 73 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 C16orf97H3BN30 126 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 M0R143 59 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 PHOX2AO14813 284 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 WNT9BO14905 357 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 NDUFB3O43676 98 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 ACTL6BO94805 426 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 IGKV1D-33P01593 117 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 IGKV1-33P01594 117 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 AMBPP02760 352 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 OR9G9P0C7N8 305 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 GZMBP10144 247 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 GATA3P23771 443 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 BRS3P32247 399 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 PRRX1P54821 245 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 GNB1P62873 340 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 RPL31P62899 125 aaKnown RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 RPL8P62917 257 aaKnown RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 USF2Q15853 346 aaPredicted RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 STUMQ69YW2 141 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 TEX38Q6PEX7 206 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 ZNF788Q6ZQV5 615 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 Q6ZR03 302 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 C19orf35Q6ZS72 473 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 MYPOPQ86VE0 399 aaPredicted RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 MOGAT3Q86VF5 341 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 PRIMA1Q86XR5 153 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 BAGE3Q86Y29 109 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 BAGE2Q86Y30 109 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 LINC00311Q8N616 119 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 SIGLECL1Q8N7X8 197 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 NECAP1Q8NC96 275 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 OR5AU1Q8NGC0 362 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 OR4P4Q8NGL7 312 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 RNASE6Q93091 150 aaKnown RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 CYYR1Q96J86 154 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 ZNF714Q96N38 554 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 MGST2Q99735 147 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 C1orf43Q9BWL3 253 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 SAMD10Q9BYL1 202 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 PRDM13Q9H4Q3 707 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 PATZ1Q9HBE1 687 aaKnown RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 ZNF331Q9NQX6 463 aaPredicted RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 RPUSD1Q9UJJ7 312 aaKnown RBP4.96□□□□□ -1.62
CPSF2-205ENST00000556622 CREBBPQ92793 2442 aa4.96□□□□□ -1.62
CPSF2-205ENST00000556622 SAA2-SAA4A0A096LPE2 208 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 IGHV3-43A0A0B4J1X8 118 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 FAM231BA6NCW3 169 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 A8MWP6 167 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 PRSS46E5RG02 174 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 K7EQM0 130 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 FCN1O00602 326 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 RRHO14718 337 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 SLC31A2O15432 143 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 SPRY3O43610 288 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 COX7A2P2O60397 106 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 OR7C2O60412 319 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 MMP23AO75900 390 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 CA2P00918 260 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 RBP4P02753 201 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 SAA2P0DJI9 122 aaPredicted RBP4.95□□□□□ -1.62
CPSF2-205ENST00000556622 IGHV3-43DP0DP04 118 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 CEBPDP49716 269 aaPredicted RBP4.95□□□□□ -1.62
CPSF2-205ENST00000556622 PPOXP50336 477 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 ZNF83P51522 516 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 BRWD1-AS2P59051 145 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 UBE2G2P60604 165 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 CX3CL1P78423 397 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 PSG5Q15238 335 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 PMCHL1Q16048 86 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 ALKBH6Q3KRA9 238 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 CT45A1Q5HYN5 189 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 C1orf194Q5T5A4 169 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 ZNF833PQ6ZTB9 187 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 FAM231DQ6ZW35 169 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 SSX7Q7RTT5 188 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 ATP5L2Q7Z4Y8 100 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 ABHD12Q8N2K0 398 aa4.95□□□□□ -1.62
CPSF2-205ENST00000556622 OR4B1Q8NGF8 309 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms