RNA–Protein interactions for RNA: ENST00000556079.1

TMEM260-209, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 596 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-209ENST00000556079 RBMS2Q15434 407 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 NMSQ5H8A3 153 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 RBPMS2Q6ZRY4 209 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 HSD17B13Q7Z5P4 300 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM116Q8NCL8 245 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 C15orf40Q8WUR7 153 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 RRNAD1Q96FB5 475 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 PRRT1Q99946 306 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 SPATA25Q9BR10 227 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 MAGT1Q9H0U3 335 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 ZMAT4Q9H898 229 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 HEYLQ9NQ87 328 aaPredicted RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 THYN1Q9P016 225 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 MRPL27Q9P0M9 148 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 TMEM56-RWDD3S4R434 201 aa4.72□□□□□ -1.65
TMEM260-209ENST00000556079 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
TMEM260-209ENST00000556079 MPTX1A8MV57 137 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 TSPAN4O14817 238 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 ADAP1O75689 374 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 CCNKO75909 580 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 DFFBO76075 338 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 HOXB5P09067 269 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 ANXA7P20073 488 aaKnown RBP4.71□□□□□ -1.66
TMEM260-209ENST00000556079 SNCAP37840 140 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 ELLP55199 621 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-209ENST00000556079 SPCS3P61009 180 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 DHODHQ02127 395 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 TNFRSF9Q07011 255 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 SURF2Q15527 256 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-209ENST00000556079 DEFB135Q30KP9 77 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 AARDQ4LEZ3 155 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 FAM90A2PQ658T7 463 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 LEMD1Q68G75 181 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 PRSS54Q6PEW0 395 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 SPSB3Q6PJ21 355 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 TCF24Q7RTU0 167 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 SLC16A13Q7RTY0 426 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 TOMM5Q8N4H5 51 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 ACY3Q96HD9 319 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 OR10C1Q96KK4 312 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 OVOL2Q9BRP0 275 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 PDCD10Q9BUL8 212 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 GGTLC1Q9BX51 225 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 MAP6D1Q9H9H5 199 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 ENY2Q9NPA8 101 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-209ENST00000556079 DNAH6Q9C0G6 4158 aa4.71□□□□□ -1.66
TMEM260-209ENST00000556079 FAT2Q9NYQ8 4349 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 DNAH17Q9UFH2 4485 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 TRAV14DV4A0A0A6YYC5 116 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 KNCNA6PVL3 124 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 C15orf62A8K5M9 175 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 INS-IGF2F8WCM5 200 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 H3BP45 60 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 K7EMT4 169 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 CYB5BO43169 146 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 CLN5O75503 358 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 IGLC1P0CG04 106 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 SULT1A3P0DMM9 295 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 SULT1A4P0DMN0 295 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 NPY1RP25929 384 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 SMCO1Q147U7 214 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 USF2Q15853 346 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-209ENST00000556079 STPG3Q8N7X2 389 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 DUSP18Q8NEJ0 188 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 SLC24A4Q8NFF2 622 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 OR1S1Q8NH92 325 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 NPIPB3Q92617 1050 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 MARC2Q969Z3 335 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 GALNT14Q96FL9 552 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
TMEM260-209ENST00000556079 HSPB7Q9UBY9 170 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 SCP2D1Q9UJQ7 156 aa4.7□□□□□ -1.66
TMEM260-209ENST00000556079 IGKV1D-37A0A075B6S9 117 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 LOC102724200A0A096LPH7 203 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-209ENST00000556079 TRAV25A0A0B4J276 109 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 A0A0B4J2A0 478 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 CCSO14618 274 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 DEFB4AO15263 64 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 PLA2G10O15496 165 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 PITX3O75364 302 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 ATG12O94817 140 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 SFT2D2O95562 160 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 IFNA10P01566 189 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 OR10J1P30954 320 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 S100A5P33763 92 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 NPBWR1P48145 328 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 DEFB131AP59861 70 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 ZNF90Q03938 601 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 RELQ04864 619 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-209ENST00000556079 OR2F1Q13607 317 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 PMS2P11Q13670 270 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 C2orf83Q53S99 150 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 GGNBP1Q5YKI7 109 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 ZNF600Q6ZNG1 722 aa4.69□□□□□ -1.66
TMEM260-209ENST00000556079 TMEM182Q6ZP80 229 aaPredicted RBP4.69□□□□□ -1.66
TMEM260-209ENST00000556079 LGI3Q8N145 548 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms