RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, human

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATL1-208	ENST00000556067	MRGPRG-AS1	Q2M3A8	158 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	AKIRIN2	Q53H80	203 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067		Q56UQ5	140 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	CTRB2	Q6GPI1	263 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067		Q6YL49	198 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	SLC7A5P1	Q8MH63	180 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	BPIFC	Q8NFQ6	507 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	OR1L4	Q8NGR5	311 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	OR2T6	Q8NHC8	308 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	SFT2D1	Q8WV19	159 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	TMEM170A	Q8WVE7	144 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	NPIPB3	Q92617	1050 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	MARC2	Q969Z3	335 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	ZNF503	Q96F45	646 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	CXorf58	Q96LI9	332 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	PFDN5	Q99471	154 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	C19orf24	Q9BVV8	132 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	PRSS22	Q9GZN4	317 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	NPFFR1	Q9GZQ6	430 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	TNFRSF19	Q9NS68	423 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	VPREB3	Q9UKI3	123 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	PXMP4	Q9Y6I8	212 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	TENM4	Q6N022	2769 aa		4.38	□□□□□ -1.71
ATL1-208	ENST00000556067	ARHGAP32	A7KAX9	2087 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	PTPN13	Q12923	2485 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	IGHV3-21	A0A0B4J1V1	117 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	CTXND1	A0A1B0GTU2	59 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067		A0A1B0GV50	99 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	MDFIC2	A0A1B0GVS7	189 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067		A0A1B0GW64	132 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TCRBV4S1A1T	A0A5B7	111 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	KRTAP23-1	A1A580	65 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	RAB19	A4D1S5	217 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	ATP6V0E1	O15342	81 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	HOXA3	O43365	443 aa	Predicted RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	GNG7	O60262	68 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	COX7A2P2	O60397	106 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	CRYBA1	P05813	215 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	CDC34	P49427	236 aa	Predicted RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	PPT1	P50897	306 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TAS2R45	P59539	299 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	SLC35B1	P78383	322 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	ATP5G2	Q06055	141 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	PEA15	Q15121	130 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TOR2A	Q5JU69	321 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	IGFL4	Q6B9Z1	124 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	PVRIG	Q6DKI7	326 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	FAM122C	Q6P4D5	195 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	UQCC3	Q6UW78	93 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	CYP2G1P	Q6ZSU1	146 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	IQCF2	Q8IXL9	164 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	CIART	Q8N365	385 aa	Predicted RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TMEM86B	Q8N661	226 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	THAP8	Q8NA92	274 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	NECAP1	Q8NC96	275 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	OR4X1	Q8NH49	305 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	PIFO	Q8TCI5	191 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	VN1R17P	Q8TDU5	208 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	ZNF418	Q8TF45	676 aa	Predicted RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067		Q8WTZ3	238 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	EEF1AKMT3	Q96AZ1	226 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	NARS2	Q96I59	477 aa	Known RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	RAX2	Q96IS3	184 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TRGV9	Q99603	122 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	MGST2	Q99735	147 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TXN2	Q99757	166 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	HSPB9	Q9BQS6	159 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	GGTLC1	Q9BX51	225 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	EIF5A2	Q9GZV4	153 aa	Known RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	TREM1	Q9NP99	234 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	RPRM	Q9NS64	109 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	C21orf62	Q9NYP8	219 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	RNF24	Q9Y225	148 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	SOX21	Q9Y651	276 aa	Predicted RBP	4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	CENPE	Q02224	2701 aa		4.37	□□□□□ -1.71
ATL1-208	ENST00000556067	ABCA12	Q86UK0	2595 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	IGLV11-55	A0A075B6I3	123 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	TRAV1-1	A0A0B4J248	108 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067		A0A0G2JLM5	398 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	MAP1LC3B2	A6NCE7	125 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	SH2D7	A6NKC9	451 aa	Predicted RBP	4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	FAM223B	A6NKX1	122 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067		H3BUA1	57 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067		I3L2K1	104 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	CLN5	O75503	358 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	OR2J3	O76001	311 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	IGHV3-48	P01763	117 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	IGHG2	P01859	326 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	IGF1	P05019	195 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	OR5G3	P0C626	314 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	LINC00869	P0C866	280 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	RD3L	P0DJH9	198 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	GYPE	P15421	78 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	MDK	P21741	143 aa	Predicted RBP	4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	TAGLN2	P37802	199 aa	Known RBP	4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	PSMB3	P49720	205 aa		4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	SSBP2	P81877	361 aa	Predicted RBP	4.36	□□□□□ -1.71
ATL1-208	ENST00000556067	SRSF2	Q01130	221 aa	Known RBP	4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms