RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 AKIRIN2Q53H80 203 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 DHRS4L2Q6PKH6 230 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 OR4E2Q8NGC2 313 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 OR51A2Q8NGJ7 313 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 C10orf105Q8TEF2 133 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 ZC2HC1AQ96GY0 325 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 PAIP2Q9BPZ3 127 aaKnown RBP0.89□□□□□ -2.27
SCFD1-217ENST00000555953 ENY2Q9NPA8 101 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 MED29Q9NX70 200 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 OR5AC2Q9NZP5 309 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 SS18L2Q9UHA2 77 aa0.89□□□□□ -2.27
SCFD1-217ENST00000555953 FAM32AQ9Y421 112 aaKnown RBP0.89□□□□□ -2.27
SCFD1-217ENST00000555953 MYH7BA7E2Y1 1941 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 IGKV3-7A0A075B6H7 116 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 HCRTO43612 131 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 PDE6DO43924 150 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 SERPINE1P05121 402 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 LYNX1P0DP58 116 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 CRYGAP11844 174 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 RNASE3P12724 160 aaKnown RBP0.88□□□□□ -2.27
SCFD1-217ENST00000555953 PPIBP23284 216 aaKnown RBP0.88□□□□□ -2.27
SCFD1-217ENST00000555953 FKBP2P26885 142 aaKnown RBP0.88□□□□□ -2.27
SCFD1-217ENST00000555953 YPEL3P61236 119 aaPredicted RBP0.88□□□□□ -2.27
SCFD1-217ENST00000555953 ZNF846Q147U1 533 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 RHEBQ15382 184 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 SPA17Q15506 151 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 DPPA3Q6W0C5 159 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 Q6ZQT0 140 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 LYG2Q86SG7 212 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 TRAPPC6BQ86SZ2 158 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 LINC00471Q8N535 108 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 C12orf29Q8N999 325 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 PXT1Q8NFP0 134 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 OR5A1Q8NGJ0 315 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 OR4C6Q8NH72 309 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 SLC25A40Q8TBP6 338 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 WFDC5Q8TCV5 224 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 BTF3L4Q96K17 158 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 SERPINI1Q99574 410 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 SLC50A1Q9BRV3 221 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 ARMC1Q9NVT9 282 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 SCN10AQ9Y5Y9 1956 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 UBR2Q8IWV8 1755 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 DOCK3Q8IZD9 2030 aa0.88□□□□□ -2.27
SCFD1-217ENST00000555953 ARFGEF3Q5TH69 2177 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 ALPK2Q86TB3 2170 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 TNRC6BQ9UPQ9 1833 aaKnown RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 hCG_1818297A0A087WSY0 165 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 IGKV1-9A0A0C4DH69 117 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 A8MT66 165 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 J3QRK9 145 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 OR7C1O76099 320 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 C1QBP02746 253 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 C8GP07360 202 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 SPI1P17947 270 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 LIN52Q52LA3 116 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 LINC01554Q52M75 96 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 PHF13Q86YI8 300 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 SMIM20Q8N5G0 67 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 STAG3L4Q8TBR4 150 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 AP3S1Q92572 193 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 ADAT3Q96EY9 351 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 CEP19Q96LK0 163 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 C2orf50Q96LR7 162 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 NMNAT1Q9HAN9 279 aaPredicted RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 OSTCQ9NRP0 149 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 GID8Q9NWU2 228 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 TAS2R4Q9NYW5 299 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 OPTCQ9UBM4 332 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 ARL2BPQ9Y2Y0 163 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 UTP11Q9Y3A2 253 aaKnown RBP0.87□□□□□ -2.27
SCFD1-217ENST00000555953 TAF1LQ8IZX4 1826 aa0.87□□□□□ -2.27
SCFD1-217ENST00000555953 AHNAK2Q8IVF2 5795 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 TRAV14DV4A0A0A6YYC5 116 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 C1orf196B1AJZ1 125 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 OR2T1O43869 369 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 MFSD11O43934 449 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 ASAH2BP0C7U1 165 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 MIFP14174 115 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 CASP1P29466 404 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 ATP5G3P48201 142 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 CRYBA4P53673 196 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 ARF6P62330 175 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 MRPS25P82663 173 aaKnown RBP0.86□□□□□ -2.27
SCFD1-217ENST00000555953 SURF2Q15527 256 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-217ENST00000555953 TEX36Q5VZQ5 186 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 AQP3Q92482 292 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 GPR146Q96CH1 333 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 PHB2Q99623 299 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 KIFC1Q9BW19 673 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 REG4Q9BYZ8 158 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 TRABDQ9H4I3 376 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 NHP2Q9NX24 153 aaKnown RBP0.86□□□□□ -2.27
SCFD1-217ENST00000555953 TVP23BQ9NYZ1 205 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 EPDR1Q9UM22 224 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 FLG2Q5D862 2391 aaPredicted RBP0.86□□□□□ -2.27
SCFD1-217ENST00000555953 FMN1Q68DA7 1419 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 OBSL1O75147 1896 aa0.86□□□□□ -2.27
SCFD1-217ENST00000555953 CACNA1BQ00975 2339 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms