RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PPIBP23284 216 aaKnown RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 OPRM1P35372 400 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 LPAR6P43657 344 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 H2BFSP57053 126 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 UBE2G2P60604 165 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 MAGOHP61326 146 aaKnown RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF117Q03924 483 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 EMX2Q04743 252 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 SMAGPQ0VAQ4 97 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 C4orf26Q17RF5 130 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 DEFB110Q30KQ9 67 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 TMEM176BQ3YBM2 270 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 SPATA31B1PQ5VZV4 182 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 SLC48A1Q6P1K1 146 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 DRAM2Q6UX65 266 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 Q6ZS92 163 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 SSX8Q7RTT4 187 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 FUNDC1Q8IVP5 155 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 LRRC25Q8N386 305 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF675Q8TD23 568 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 NAT14Q8WUY8 206 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 PPCDCQ96CD2 204 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 TLCD1Q96CP7 247 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 CDCA4Q9BXL8 241 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 LRTM1Q9HBL6 345 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 PAQR5Q9NXK6 330 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 CALML5Q9NZT1 146 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 BOKQ9UMX3 212 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 TP53TG1Q9Y2A0 90 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 SPTBP11277 2137 aa2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZFC3H1O60293 1989 aaKnown RBP2.38□□□□□ -2.03
CKS1BP1-201ENST00000555221 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 EVPLLA8MZ36 301 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 HPGDSO60760 199 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 PIAS1O75925 651 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 IFNA14P01570 189 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 SHBGP04278 402 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 COX6A1P12074 109 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 S100A3P33764 101 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 FGF12P61328 243 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 STX5Q13190 355 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF181Q2M3W8 571 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 TNFAIP8L3Q5GJ75 292 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 DNM1P34Q6PK57 102 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 CCDC121Q6ZUS5 278 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 COMMD6Q7Z4G1 85 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 PLCZ1Q86YW0 608 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 C10orf67Q8IYJ2 551 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 C4orf33Q8N1A6 199 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 FDCSPQ8NFU4 85 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR8J2Q8NGG1 315 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR10A6Q8NH74 314 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 C16orf78Q8WTQ4 265 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 TESCQ96BS2 214 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 UPK3BQ9BT76 320 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 MND1Q9BWT6 205 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 DPY30Q9C005 99 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR8D2Q9GZM6 311 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 NSRP1Q9H0G5 558 aaKnown RBP2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 CXorf21Q9HAI6 301 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 ASB4Q9Y574 426 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 DNAJC15Q9Y5T4 150 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
CKS1BP1-201ENST00000555221 CCDC168Q8NDH2 2452 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 NBASA2RRP1 2371 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 FLNAP21333 2647 aaKnown RBP2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF860A6NHJ4 632 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 ITGB1BP1O14713 200 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 DEDDO75618 318 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 CD7P09564 240 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 LINC00032P0C843 101 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 CD40LGP29965 261 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 CD79BP40259 229 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 BTG2P78543 158 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 HPCAP84074 193 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 PLGLB1Q02325 96 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 MESTQ5EB52 335 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 ST6GALNAC3Q8NDV1 305 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR4C16Q8NGL9 310 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 RASSF5Q8WWW0 418 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 SLC35B4Q969S0 331 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 CMTM5Q96DZ9 223 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 CHMP6Q96FZ7 201 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 OR52E6Q96RD3 313 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 MGLLQ99685 303 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 GNB1LQ9BYB4 327 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 MROQ9BYG7 248 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 HDHD2Q9H0R4 259 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 GID8Q9NWU2 228 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 TXNL4BQ9NX01 149 aaKnown RBP2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 PSORS1C2Q9UIG4 136 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 ZNF337Q9Y3M9 751 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 TIMM22Q9Y584 194 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 V9GYY5 206 aaPredicted RBP2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 HEATR5BQ9P2D3 2071 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 POLEQ07864 2286 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 PTPRBP23467 1997 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 MGAQ8IWI9 3026 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 AKAP13Q12802 2813 aa2.36□□□□□ -2.03
CKS1BP1-201ENST00000555221 PKD1L1Q8TDX9 2849 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms