RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 GGACTQ9BVM4 153 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 WDR61Q9GZS3 305 aaKnown RBP8.44□□□□□ -1.06
SHMT2-218ENST00000555213 SH3BGRL3Q9H299 93 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 MRPL36Q9P0J6 103 aaKnown RBP8.44□□□□□ -1.06
SHMT2-218ENST00000555213 PAIP2BQ9ULR5 123 aaKnown RBP8.44□□□□□ -1.06
SHMT2-218ENST00000555213 TRBV7-1A0A0A6YYK4 115 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 BORCS7-ASMTA0A0B4J1R7 106 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 LINC01619G3V211 115 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 I3L521 148 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 DFFBO76075 338 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 IFNA7P01567 189 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 HSPB1P04792 205 aaKnown RBP8.43□□□□□ -1.06
SHMT2-218ENST00000555213 IFNA4P05014 189 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 SEC11BP0C7V7 166 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 ZP3P21754 424 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 GPX4P36969 197 aaPredicted RBP8.43□□□□□ -1.06
SHMT2-218ENST00000555213 RAB11AP62491 216 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 HBG1P69891 147 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 HBG2P69892 147 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 CD69Q07108 199 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 GAMTQ14353 236 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 ZNF343Q6P1L6 599 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 HSD17B11Q8NBQ5 300 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 OR11H1Q8NG94 326 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 VN1R17PQ8TDU5 208 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 PINX1Q96BK5 328 aaKnown RBP8.43□□□□□ -1.06
SHMT2-218ENST00000555213 MISP3Q96FF7 219 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 FANCD2OSQ96PS1 177 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 TMEM147Q9BVK8 224 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 PEF1Q9UBV8 284 aaKnown RBP8.43□□□□□ -1.06
SHMT2-218ENST00000555213 WDR83OSQ9Y284 106 aa8.43□□□□□ -1.06
SHMT2-218ENST00000555213 LSM4Q9Y4Z0 139 aaKnown RBP8.43□□□□□ -1.06
SHMT2-218ENST00000555213 IGKV1OR2-108A0A075B7D4 117 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 ANKRD34BA5PLL1 514 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 FNDC10F2Z333 226 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 I3L2K1 104 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 SCGB2A1O75556 95 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 NDUFB8O95169 186 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 NMBP08949 121 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 CD33P20138 364 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 FHL3Q13643 280 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 ZNF266Q14584 549 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
SHMT2-218ENST00000555213 CACNG8Q8WXS5 425 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 DUX3Q96PT4 197 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 SLC25A32Q9H2D1 315 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 UQCC1Q9NVA1 299 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 GAR1Q9NY12 217 aaKnown RBP8.42□□□□□ -1.06
SHMT2-218ENST00000555213 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 UBQLN2Q9UHD9 624 aa8.42□□□□□ -1.06
SHMT2-218ENST00000555213 IGHV4OR15-8A0A075B7B6 117 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 A0A087WW49 117 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.41□□□□□ -1.06
SHMT2-218ENST00000555213 MFSD2BA6NFX1 497 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 OPRK1P41145 380 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 SULT1A2P50226 295 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 EIF5AP63241 154 aaKnown RBP8.41□□□□□ -1.06
SHMT2-218ENST00000555213 RPEL1Q2QD12 228 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 TMEM182Q6ZP80 229 aaPredicted RBP8.41□□□□□ -1.06
SHMT2-218ENST00000555213 LINC00482Q8N8I6 264 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 ATP6V0BQ99437 205 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 MGST2Q99735 147 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 RSG1Q9BU20 258 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 MCRIP2Q9BUT9 160 aaKnown RBP8.41□□□□□ -1.06
SHMT2-218ENST00000555213 GPR61Q9BZJ8 451 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 NPVFQ9HCQ7 196 aa8.41□□□□□ -1.06
SHMT2-218ENST00000555213 IGKV1D-37A0A075B6S9 117 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 UBE2L5PA0A1B0GUS4 154 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 K7EIM0 57 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 WIPF1O43516 503 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 SCAF4O95104 1147 aaKnown RBP8.4□□□□□ -1.06
SHMT2-218ENST00000555213 MT-CO2P00403 227 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 IFNA5P01569 189 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 LINC00869P0C866 280 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-218ENST00000555213 GPR183P32249 361 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 ARL3P36405 182 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 Q56UQ5 140 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 ETFRF1Q6IPR1 90 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 BTNL8Q6UX41 500 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 CLEC19AQ6UXS0 136 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 TMEM144Q7Z5S9 345 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 LILRB2Q8N423 598 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 OR2G3Q8NGZ4 309 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 ZNF502Q8TBZ5 544 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 PSMG3Q9BT73 122 aaPredicted RBP8.4□□□□□ -1.06
SHMT2-218ENST00000555213 VSIRQ9H7M9 311 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 TIMM9Q9Y5J7 89 aa8.4□□□□□ -1.06
SHMT2-218ENST00000555213 WNK1Q9H4A3 2382 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 GGCTO75223 188 aaKnown RBP8.39□□□□□ -1.07
SHMT2-218ENST00000555213 FGF7P21781 194 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 NPBWR1P48145 328 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 FHITP49789 147 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 MFAP4P55083 255 aa8.39□□□□□ -1.07
SHMT2-218ENST00000555213 ACSM6Q6P461 480 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms