RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 RGCCQ9H4X1 137 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 ARMC7Q9H6L4 198 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 WDR55Q9H6Y2 383 aaPredicted RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 REEP1Q9H902 201 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TPT1P8Q9HAU6 139 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 SLC22A13Q9Y226 551 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF257Q9Y2Q1 563 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TBL2Q9Y4P3 447 aaKnown RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LHFPL6Q9Y693 200 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 V9GYQ6 96 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LOC102724200A0A096LPH7 203 aaPredicted RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LOC102725191A0A1B0GVB3 256 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LEUTXA8MZ59 168 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 PPP5D1E7EU14 171 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 BUB1B-PAK6H3BSN5 160 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 M0R1X1 148 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LGALS9O00182 355 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 CCRL2O00421 344 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 FAAHO00519 579 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 CDC42EP2O14613 210 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TOR1AO14656 332 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 GMDSO60547 372 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 NOS1APO75052 506 aaPredicted RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 UPK1BO75841 260 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 S1PR2O95136 353 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 IFNA21P01568 189 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 IFNA17P01571 189 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1-17P01599 117 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 IGHG2P01859 326 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TRGV3P03979 118 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 CD5P06127 495 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 SRMP19623 302 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 CFL1P23528 166 aaKnown RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 HLA-DMBP28068 263 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 PHBP35232 272 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 CAV3P56539 151 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 MTPNP58546 118 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 FAM3AP98173 230 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 RPL18AQ02543 176 aaKnown RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 CASP8Q14790 479 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 HIST3H3Q16695 136 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 HLA-DRB5Q30154 266 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 SMIM21Q3B7S5 101 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 PRR9Q5T870 116 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TMEM236Q5W0B7 351 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LCN8Q6JVE9 175 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TBPL2Q6SJ96 375 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LYPD6Q86Y78 171 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 MIR7-3HGQ8N6C7 128 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LFNGQ8NES3 379 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 OR10X1Q8NGY0 326 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 OR11H2Q8NH07 326 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 OR4K13Q8NH42 304 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 OR1L1Q8NH94 360 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 OR5K1Q8NHB7 308 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 GRPEL2Q8TAA5 225 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 ENKURQ8TC29 256 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 TMEM239Q8WW34 195 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LZICQ8WZA0 190 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 RDH12Q96NR8 316 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 SPACA5Q96QH8 159 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 PRSS27Q9BQR3 290 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 RTL8AQ9BWD3 113 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 NDEL1Q9GZM8 345 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 C20orf27Q9GZN8 174 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 HDHD2Q9H0R4 259 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 ABCG5Q9H222 651 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 RBFOX1Q9NWB1 397 aaKnown RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF229Q9UJW7 825 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 APLNQ9ULZ1 77 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 SNX12Q9UMY4 172 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 UTP11Q9Y3A2 253 aaKnown RBP0.82□□□□□ -2.28
PRPF39-208ENST00000554785 MED31Q9Y3C7 131 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 LRRC42Q9Y546 428 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 OR51B2Q9Y5P1 312 aa0.82□□□□□ -2.28
PRPF39-208ENST00000554785 DNAH11Q96DT5 4516 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB131BA0A096LNP1 70 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 TRGV10A0A0A0MS01 117 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 TRAV41A0A0B4J266 112 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 CENPXA8MT69 81 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 H0Y980 276 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 H3BSA7 217 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 M0QX08 132 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 M0QZK8 103 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 COPEO14579 308 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 MYL12BO14950 172 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 PSPHP1O15172 72 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 SCO1O75880 301 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 IGLV2-8P01709 118 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 SHBGP04278 402 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 LGALS1P09382 135 aaKnown RBP0.81□□□□□ -2.28
PRPF39-208ENST00000554785 HIST1H1CP16403 213 aaKnown RBP0.81□□□□□ -2.28
PRPF39-208ENST00000554785 PRKACAP17612 351 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 PRKACBP22694 351 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 BLVRBP30043 206 aaPredicted RBP0.81□□□□□ -2.28
PRPF39-208ENST00000554785 SLC6A1P30531 599 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 MAGEA12P43365 314 aa0.81□□□□□ -2.28
PRPF39-208ENST00000554785 CMC4P56277 68 aaPredicted RBP0.81□□□□□ -2.28
PRPF39-208ENST00000554785 GNG11P61952 73 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms