RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 COA4Q9NYJ1 87 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 JPT1Q9UK76 154 aa6.83□□□□□ -1.32
TDP1-208ENST00000553989 FOXA2Q9Y261 457 aaPredicted RBP6.83□□□□□ -1.32
TDP1-208ENST00000553989 SAA2-SAA4A0A096LPE2 208 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 IGSF23A1L1A6 192 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 C5orf52A6NGY3 159 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 IGHV3-11P01762 117 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 LGALS1P09382 135 aaKnown RBP6.82□□□□□ -1.32
TDP1-208ENST00000553989 SAA2P0DJI9 122 aaPredicted RBP6.82□□□□□ -1.32
TDP1-208ENST00000553989 TPPP2P59282 170 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
TDP1-208ENST00000553989 KIAA0141Q14154 515 aaPredicted RBP6.82□□□□□ -1.32
TDP1-208ENST00000553989 SLC25A24Q6NUK1 477 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 HAPLN4Q86UW8 402 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 IL1F10Q8WWZ1 152 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 GALMQ96C23 342 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 GPR146Q96CH1 333 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 FLYWCH2Q96CP2 140 aaKnown RBP6.82□□□□□ -1.32
TDP1-208ENST00000553989 TVP23CQ96ET8 276 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 RITA1Q96K30 269 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 NABP2Q9BQ15 211 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 ELOVL1Q9BW60 279 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 TOLLIPQ9H0E2 274 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 FBXL15Q9H469 300 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 TMEM242Q9NWH2 141 aa6.82□□□□□ -1.32
TDP1-208ENST00000553989 METTL1Q9UBP6 276 aaKnown RBP6.82□□□□□ -1.32
TDP1-208ENST00000553989 LCE6AA0A183 80 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 UBE2CO00762 179 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 SYNGR2O43760 224 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 SSSCA1O60232 199 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 SOX15O60248 233 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 YPEL1O60688 119 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 OR2C1O95371 312 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 IFNA1P01562 189 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 MBP02144 154 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 SRP19P09132 144 aaKnown RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 RPL35P42766 123 aaKnown RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 PAX9P55771 341 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 NDPQ00604 133 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 ACSM6Q6P461 480 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 SPSB3Q6PJ21 355 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 UNQ5815/PRO19632Q6UWF5 114 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 ZNF833PQ6ZTB9 187 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 C5orf24Q7Z6I8 188 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 NPBQ8NG41 125 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 RNASE11Q8TAA1 199 aaKnown RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 CYYR1Q96J86 154 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 MS4A10Q96PG2 267 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 YPEL2Q96QA6 119 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 C12orf57Q99622 126 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 FAM103A1Q9BTL3 118 aaKnown RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 ZNF355PQ9NSJ1 428 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 FBXO7Q9Y3I1 522 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 RBM7Q9Y580 266 aaKnown RBP6.81□□□□□ -1.32
TDP1-208ENST00000553989 TIMM9Q9Y5J7 89 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 STAB2Q8WWQ8 2551 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 SORL1Q92673 2214 aa6.81□□□□□ -1.32
TDP1-208ENST00000553989 IGKV1D-13A0A0B4J2D9 117 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 IGKV1-6A0A0C4DH72 117 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 RRHO14718 337 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 NDUFA3O95167 84 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 SMIM6P0DI80 62 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 OR13C7P0DN81 318 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 IGHV4-30-4P0DP06 118 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 IGKV1-13P0DP09 117 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 UBE2KP61086 200 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 SNRPEP62304 92 aaKnown RBP6.8□□□□□ -1.32
TDP1-208ENST00000553989 CX3CL1P78423 397 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 HTD2P86397 168 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 RPL39P5Q59GN2 51 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 PPP1R27Q86WC6 154 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 CIB3Q96Q77 187 aaPredicted RBP6.8□□□□□ -1.32
TDP1-208ENST00000553989 NIPSNAP3BQ9BS92 247 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 CTDSP1Q9GZU7 261 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 PARP12Q9H0J9 701 aaKnown RBP6.8□□□□□ -1.32
TDP1-208ENST00000553989 MAGT1Q9H0U3 335 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 SH3BGRL3Q9H299 93 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 PSENENQ9NZ42 101 aa6.8□□□□□ -1.32
TDP1-208ENST00000553989 H3BQ15 152 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 RAB29O14966 203 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 CST7O76096 145 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 TRGV3P03979 118 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 CEACAM6P40199 344 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 FHITP49789 147 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 CD81P60033 236 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 CCL20P78556 96 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 AKIRIN2Q53H80 203 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 FAM71F2Q6NXP2 309 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 ADAMTSL5Q6ZMM2 481 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 IFI27L2Q9H2X8 130 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 TMPRSS5Q9H3S3 457 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.79□□□□□ -1.32
TDP1-208ENST00000553989 WASHC3Q9Y3C0 194 aa6.79□□□□□ -1.32
TDP1-208ENST00000553989 PUS1Q9Y606 427 aaKnown RBP eCLIP6.79□□□□□ -1.32
TDP1-208ENST00000553989 LOC102723971A0A1B0GUV8 181 aa6.78□□□□□ -1.32
TDP1-208ENST00000553989 FCN1O00602 326 aa6.78□□□□□ -1.32
TDP1-208ENST00000553989 TMEM50AO95807 157 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms