RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 SLC35E1Q96K37 410 aa13.84□□□□□ -0.19
PSEN1-208ENST00000553719 OR4F4Q96R69 305 aa13.84□□□□□ -0.19
PSEN1-208ENST00000553719 HSPB11Q9Y547 144 aa13.84□□□□□ -0.19
PSEN1-208ENST00000553719 M0QZ24 198 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 GNG7O60262 68 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 HOXD3P31249 432 aaPredicted RBP13.83□□□□□ -0.2
PSEN1-208ENST00000553719 S100A11P31949 105 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 CD300CQ08708 224 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 TMEM217Q8N7C4 229 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 ACY3Q96HD9 319 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 NEURL2Q9BR09 285 aa13.83□□□□□ -0.2
PSEN1-208ENST00000553719 PKD1L1Q8TDX9 2849 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 FXYD6-FXYD2A0A087WZ82 144 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 GGCTO75223 188 aaKnown RBP13.82□□□□□ -0.2
PSEN1-208ENST00000553719 HBG1P69891 147 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 HBG2P69892 147 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 TMEM144Q7Z5S9 345 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 OR1S2Q8NGQ3 325 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 OR5C1Q8NGR4 320 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 ZC4H2Q9NQZ6 224 aa13.82□□□□□ -0.2
PSEN1-208ENST00000553719 LSM4Q9Y4Z0 139 aaKnown RBP13.82□□□□□ -0.2
PSEN1-208ENST00000553719 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
PSEN1-208ENST00000553719 ZP3P21754 424 aa13.81□□□□□ -0.2
PSEN1-208ENST00000553719 OR10J1P30954 320 aa13.81□□□□□ -0.2
PSEN1-208ENST00000553719 SLURP1P55000 103 aa13.81□□□□□ -0.2
PSEN1-208ENST00000553719 KLF5Q13887 457 aaPredicted RBP13.81□□□□□ -0.2
PSEN1-208ENST00000553719 ZNF546Q86UE3 836 aa13.81□□□□□ -0.2
PSEN1-208ENST00000553719 GPHB5Q86YW7 130 aa13.81□□□□□ -0.2
PSEN1-208ENST00000553719 HMSDA8MTL9 139 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 NUPL2O15504 423 aaKnown RBP13.8□□□□□ -0.2
PSEN1-208ENST00000553719 OR2C1O95371 312 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 ATP6V1FQ16864 119 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 TIGITQ495A1 244 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 DPF1Q92782 380 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 TRGV9Q99603 122 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 TMEM147Q9BVK8 224 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 UQCC1Q9NVA1 299 aa13.8□□□□□ -0.2
PSEN1-208ENST00000553719 C1QBP02746 253 aa13.79□□□□□ -0.2
PSEN1-208ENST00000553719 YPEL3P61236 119 aaPredicted RBP13.79□□□□□ -0.2
PSEN1-208ENST00000553719 AKR1C1Q04828 323 aa13.79□□□□□ -0.2
PSEN1-208ENST00000553719 RPEL1Q2QD12 228 aa13.79□□□□□ -0.2
PSEN1-208ENST00000553719 REC114Q7Z4M0 266 aa13.79□□□□□ -0.2
PSEN1-208ENST00000553719 LILRB2Q8N423 598 aa13.79□□□□□ -0.2
PSEN1-208ENST00000553719 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
PSEN1-208ENST00000553719 WDR83OSQ9Y284 106 aa13.79□□□□□ -0.2
PSEN1-208ENST00000553719 SMCO3A2RU48 225 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 LGALS9O00182 355 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 NDUFA4O00483 81 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 ARPC5O15511 151 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 PF4P02776 101 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 UNQ9165/PRO28630Q6UXU0 137 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 ZNF600Q6ZNG1 722 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 C1QL4Q86Z23 238 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 TMEM190Q8WZ59 177 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 ZFAND3Q9H8U3 227 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 WFDC1Q9HC57 220 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 FBXL17Q9UF56 701 aa13.78□□□□□ -0.2
PSEN1-208ENST00000553719 IGHV3-35A0A0C4DH35 117 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 ZFP92A6NM28 416 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 A8MWP6 167 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 TOMM40O96008 361 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 ZNF90Q03938 601 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 RELQ04864 619 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-208ENST00000553719 ZNF345Q14585 488 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 CLINT1Q14677 625 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 TEPPQ6URK8 271 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 INO80EQ8NBZ0 244 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-208ENST00000553719 WFDC9Q8NEX5 89 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
PSEN1-208ENST00000553719 ATP5SQ99766 215 aa13.77□□□□□ -0.21
PSEN1-208ENST00000553719 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
PSEN1-208ENST00000553719 SCGB2A1O75556 95 aa13.76□□□□□ -0.21
PSEN1-208ENST00000553719 NUP62P37198 522 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-208ENST00000553719 SYNJ2BPP57105 145 aa13.76□□□□□ -0.21
PSEN1-208ENST00000553719 PRR31Q5SQ13 230 aa13.76□□□□□ -0.21
PSEN1-208ENST00000553719 MGST2Q99735 147 aa13.76□□□□□ -0.21
PSEN1-208ENST00000553719 PSG1P11464 419 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 CXCL2P19875 107 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 OR2F1Q13607 317 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 TOMM20LQ6UXN7 152 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 IL34Q6ZMJ4 242 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 TMEM182Q6ZP80 229 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-208ENST00000553719 PARD6GQ9BYG4 376 aaPredicted RBP13.75□□□□□ -0.21
PSEN1-208ENST00000553719 SMIM3Q9BZL3 60 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 MFFQ9GZY8 342 aa13.75□□□□□ -0.21
PSEN1-208ENST00000553719 PUS1Q9Y606 427 aaKnown RBP eCLIP13.75□□□□□ -0.21
PSEN1-208ENST00000553719 DNAH3Q8TD57 4116 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 DFFBO76075 338 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 FAM106AQ4KMX7 169 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 BTNL8Q6UX41 500 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 CYP2G1PQ6ZSU1 146 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 KCNRGQ8N5I3 272 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 WDR61Q9GZS3 305 aaKnown RBP13.74□□□□□ -0.21
PSEN1-208ENST00000553719 SLC45A2Q9UMX9 530 aa13.74□□□□□ -0.21
PSEN1-208ENST00000553719 WI2-2373I1.2A0A1W2PRP0 233 aa13.73□□□□□ -0.21
PSEN1-208ENST00000553719 TMEM213A2RRL7 107 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms