RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TGOLN2O43493 480 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 SYNGR2O43760 224 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 ATP5HO75947 161 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 LY6HO94772 140 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 IGHV3-53P01767 116 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 TRGV3P03979 118 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 IFNA16P05015 189 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 IL6P05231 212 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 IL3P08700 152 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 OR13C7P0DN81 318 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 RPL12P30050 165 aaKnown RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 SRP14P37108 136 aaKnown RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 OMPP47874 163 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 OR1E2P47887 323 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 NKX2-5P52952 324 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 TCL1AP56279 114 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 RPS11P62280 158 aaKnown RBP eCLIP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 BTN3A2P78410 334 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 BASP1P80723 227 aaKnown RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 TMED2Q15363 201 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 TMEM69Q5SWH9 247 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 LDLRAD2Q5SZI1 272 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 NCMAPQ5T1S8 102 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 HIST2H3PS2Q5TEC6 136 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 CYHR1Q6ZMK1 362 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 MARCH3Q86UD3 253 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 ZFP82Q8N141 532 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 RIBC1Q8N443 379 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF565Q8N9K5 539 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 MORN4Q8NDC4 146 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 OR4C13Q8NGP0 309 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 ZNRF2Q8NHG8 242 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 C10orf105Q8TEF2 133 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 Q8WTZ3 238 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 KCTD4Q8WVF5 259 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 STACQ99469 402 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 DOHHQ9BU89 302 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 MED28Q9H204 178 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 OR51V1Q9H2C8 321 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 PRTFDC1Q9NRG1 225 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 DKKL1Q9UK85 242 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 GUCA1BQ9UMX6 200 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 MMACHCQ9Y4U1 282 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 ROS1P08922 2347 aa1.72□□□□□ -2.13
SCFD1-210ENST00000553693 FREM1Q5H8C1 2179 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 MED12Q93074 2177 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 CMYA5Q8N3K9 4069 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 IGHV3OR15-7A0A075B7D8 119 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 hCG_1818297A0A087WSY0 165 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 LINC00862A6NCI5 91 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 DPRXA6NFQ7 191 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 E7EQL1 145 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 DENRO43583 198 aaKnown RBP1.71□□□□□ -2.14
SCFD1-210ENST00000553693 SH2D1AO60880 128 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 DEDDO75618 318 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 LTAP01374 205 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 IGHG2P01859 326 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 CRHP06850 196 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 SLC25A16P16260 332 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 ZNF708P17019 499 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 RPS3P23396 243 aaKnown RBP eCLIP1.71□□□□□ -2.14
SCFD1-210ENST00000553693 RPL22P35268 128 aaKnown RBP1.71□□□□□ -2.14
SCFD1-210ENST00000553693 CDKN2CP42773 168 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 MARCKSL1P49006 195 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 TBPL1P62380 186 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 FABP5Q01469 135 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 GNA13Q14344 377 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 RSU1Q15404 277 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 FAM78BQ5VT40 261 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 SPATA31B1PQ5VZV4 182 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 ZNF660Q6AZW8 331 aaPredicted RBP1.71□□□□□ -2.14
SCFD1-210ENST00000553693 GID4Q8IVV7 300 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 C3orf22Q8N5N4 141 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 KRTCAP2Q8N6L1 136 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 OR8J2Q8NGG1 315 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 OR8K1Q8NGG5 319 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 OR1P1Q8NH06 330 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 C16orf78Q8WTQ4 265 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 PTH2Q96A98 100 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 C12orf43Q96C57 262 aaKnown RBP1.71□□□□□ -2.14
SCFD1-210ENST00000553693 ACY3Q96HD9 319 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 SLC35G5Q96KT7 338 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 MGLLQ99685 303 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 OR51I2Q9H344 312 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 RNF122Q9H9V4 155 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 HRASLSQ9HDD0 168 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 SLC2A9Q9NRM0 540 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 CARHSP1Q9Y2V2 147 aaKnown RBP1.71□□□□□ -2.14
SCFD1-210ENST00000553693 PHLDA3Q9Y5J5 127 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 HEATR5BQ9P2D3 2071 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 MALRD1Q5VYJ5 2156 aa1.71□□□□□ -2.14
SCFD1-210ENST00000553693 RYR2Q92736 4967 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 FREM3P0C091 2139 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 MED12LQ86YW9 2145 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 TRBV24-1A0A075B6N3 115 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 A0A1B0GV50 99 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 H3BMM0 161 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 H3BQ85 93 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 APOC4-APOC2K7ER74 178 aa1.7□□□□□ -2.14
SCFD1-210ENST00000553693 TP53I11O14683 189 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms