RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SEC11CQ9BY50 192 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GABARAPL3Q9BY60 117 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SELENOIQ9C0D9 397 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ACTR3CQ9C0K3 210 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GABARAPL1Q9H0R8 117 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 HRH4Q9H3N8 390 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 BANF2Q9H503 90 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SRD5A3Q9H8P0 318 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 HRASLSQ9HDD0 168 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 AMBNQ9NP70 447 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 IL36GQ9NZH8 169 aa4.19□□□□□ -1.74
SMARCE1P3-201ENST00000553649 A0A1W2PPK0 400 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 C7orf66A4D0T2 115 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SMIM30A4D0T7 59 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FAM90A7PA6NKC0 464 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FAM90A23PA8MXZ1 464 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 EI24O14681 340 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ARPC1BO15143 372 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 NDUFA3O95167 84 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 IFNA5P01569 189 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 HLA-DQB1P01920 261 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CD5P06127 495 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CSN3P07498 182 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CD7P09564 240 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CT45A6P0DMU7 189 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CT45A5P0DMU8 189 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CT45A7P0DMV0 189 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RPA2P15927 270 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CRYBA4P53673 196 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RANP62826 216 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PLA2G7Q13093 441 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 KLF5Q13887 457 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FXYD3Q14802 87 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 JOSD1Q15040 202 aaPredicted RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RPEL1Q2QD12 228 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TMEM30BQ3MIR4 351 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 C6orf141Q5SZD1 244 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SAMD13Q5VXD3 122 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 AWAT2Q6E213 333 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TMEM88Q6PEY1 159 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CD200R1LQ6Q8B3 271 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GLIPR1L1Q6UWM5 242 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 LINC00336Q6ZUF6 198 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 KCTD9Q7L273 389 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SAMD12Q8N8I0 201 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 BEST4Q8NFU0 473 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR13C5Q8NGS8 318 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RNASEH2CQ8TDP1 164 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GPR148Q8TDV2 347 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 DYNLRB2Q8TF09 96 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 APH1BQ8WW43 257 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FAM46BQ96A09 425 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TMEM106AQ96A25 262 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RPUSD4Q96CM3 377 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 DAZAP1Q96EP5 407 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 C5orf30Q96GV9 206 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ABHD14BQ96IU4 210 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CHRDL1Q9BU40 450 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 IFI27L2Q9H2X8 130 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GEMIN7Q9H840 131 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SLC2A8Q9NY64 477 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RCC2Q9P258 522 aaKnown RBP4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 JPT1Q9UK76 154 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 WASHC3Q9Y3C0 194 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 URGCP-MRPS24S4R325 110 aa4.18□□□□□ -1.74
SMARCE1P3-201ENST00000553649 A0A0G2JLM5 398 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TRBV7-9A0A0J9YWB2 115 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR5H14A6NHG9 310 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 INMT-MINDY4F8WBC2 141 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 H0YJW9 148 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SMLR1H3BR10 107 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 AIREO43918 545 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 YPEL1O60688 119 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CDK2AP2O75956 126 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TOMM40O96008 361 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 MT-CO2P00403 227 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TCRBP04435 133 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 IL6RP08887 468 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR5AC1P0C628 307 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 AREGP15514 252 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FUT3P21217 361 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ZBTB25P24278 435 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PPT1P50897 306 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CRIP2P52943 208 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 MFAP4P55083 255 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 LINC00205P59089 165 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 IRF3Q14653 427 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PSG5Q15238 335 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 POU2AF1Q16633 256 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OCIAD2Q56VL3 154 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FAM90A2PQ658T7 463 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 LGALS9CQ6DKI2 356 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 DMKNQ6E0U4 476 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 STEAP1BQ6NZ63 245 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TMPRSS11AQ6ZMR5 421 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TMUB2Q71RG4 321 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 S100A7AQ86SG5 101 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 H1FOOQ8IZA3 346 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SYS1Q8N2H4 156 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CBR4Q8N4T8 237 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms