RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 OR13C8Q8NGS7 320 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SMIM4Q8WVI0 70 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 DCUN1D4Q92564 292 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 UBE2E2Q96LR5 201 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 PRRT1Q99946 306 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 PDCD10Q9BUL8 212 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 NXF2Q9GZY0 626 aaKnown RBP3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ENY2Q9NPA8 101 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ZC4H2Q9NQZ6 224 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 SLC2A9Q9NRM0 540 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
ATXN3-220ENST00000553491 A0A087WW49 117 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 PRSS46E5RG02 174 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 E7EUB6 86 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 LINC01619G3V211 115 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 OVOL1O14753 267 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 CYB5BO43169 146 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 GSTZ1O43708 216 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 SOX15O60248 233 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 SAP30O75446 220 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 DFFBO76075 338 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 CD74P04233 296 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF735P0CB33 412 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 AREGP15514 252 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 TBPP20226 339 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 ETV6P41212 452 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 MSMO1Q15800 293 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 KIAA1644Q3SXP7 199 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 C19orf35Q6ZS72 473 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 TTC9CQ8N5M4 171 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 OR4A5Q8NH83 315 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 MRGPRFQ96AM1 343 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 UHRF2Q96PU4 802 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 OR4C12Q96R67 309 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 P2RX4Q99571 388 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
ATXN3-220ENST00000553491 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
ATXN3-220ENST00000553491 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 CEBPZOSA8MTT3 80 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PPP5D1E7EU14 171 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 I3L521 148 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-220ENST00000553491 PSMB6P28072 239 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 SLC6A1P30531 599 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 SNCAP37840 140 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 DHODHQ02127 395 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PDLIM3Q53GG5 364 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 SLC35G3Q8N808 338 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 GDPD1Q8N9F7 314 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
ATXN3-220ENST00000553491 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
ATXN3-220ENST00000553491 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms