RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CFAP161Q6P656 301 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 SRSF8Q9BRL6 282 aaKnown RBP10.39□□□□□ -0.75
SHMT2-205ENST00000553474 SLC25A2Q9BXI2 301 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 FNDC4Q9H6D8 234 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-205ENST00000553474 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 ESDP10768 282 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 PLA2G2AP14555 144 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 PAX1P15863 534 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-205ENST00000553474 DEFA6Q01524 100 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 DIAPH2-AS1Q14236 149 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 PRSS8Q16651 343 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 MLANAQ16655 118 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 MUC15Q8N387 334 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 TMEM116Q8NCL8 245 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 OR5AU1Q8NGC0 362 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 NPIPB3Q92617 1050 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 IGF2BP2-AS1Q96M15 143 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 TRGV9Q99603 122 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 CLEC7AQ9BXN2 247 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 PKDREJQ9NTG1 2253 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 IGKV1D-37A0A075B6S9 117 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 IGLC7A0M8Q6 106 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 CRYGBP07316 175 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 RPL27AP46776 148 aaKnown RBP10.38□□□□□ -0.75
SHMT2-205ENST00000553474 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 CX3CL1P78423 397 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 RASL11AQ6T310 242 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 PERPQ96FX8 193 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 NOL4LQ96MY1 436 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-205ENST00000553474 CHRDL1Q9BU40 450 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 PAXXQ9BUH6 204 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
SHMT2-205ENST00000553474 UBR5O95071 2799 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-205ENST00000553474 BUB1B-PAK6H3BSN5 160 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 ADMP35318 185 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 PLP1P60201 277 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 MRGPRG-AS1Q2M3A8 158 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 IBA57Q5T440 356 aaKnown RBP10.37□□□□□ -0.75
SHMT2-205ENST00000553474 ZNF841Q6ZN19 808 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 FAM231DQ6ZW35 169 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 INSIG2Q9Y5U4 225 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 USP9XQ93008 2570 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-205ENST00000553474 IGHV1-3A0A0C4DH29 117 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 RANP62826 216 aaKnown RBP10.37□□□□□ -0.75
SHMT2-205ENST00000553474 Q0VG73 95 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 CDSNQ15517 529 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 CDPF1Q6NVV7 123 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 PPP1R27Q86WC6 154 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 TNFRSF19Q9NS68 423 aa10.37□□□□□ -0.75
SHMT2-205ENST00000553474 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 MALRD1Q5VYJ5 2156 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 SMIM27A0A1W2PRY6 76 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 J3QKU1 62 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 SLC17A3O00476 420 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 ENSAO43768 121 aaKnown RBP10.36□□□□□ -0.75
SHMT2-205ENST00000553474 IGLV2-8P01709 118 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 CRISP2P16562 243 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 HNF1AP20823 631 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 DDTP30046 118 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 ZNF672Q499Z4 452 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-205ENST00000553474 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
SHMT2-205ENST00000553474 MRPL18Q9H0U6 180 aaKnown RBP10.36□□□□□ -0.75
SHMT2-205ENST00000553474 PPIAL4CA0A0B4J2A2 164 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 FCN1O00602 326 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 PPIAL4GP0DN37 164 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 TMEM11P17152 192 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 LBHQ53QV2 105 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-205ENST00000553474 PATE2Q6UY27 113 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 OR8B3Q8NGG8 313 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 OR1L6Q8NGR2 347 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 OR8B2Q96RD0 313 aa10.35□□□□□ -0.75
SHMT2-205ENST00000553474 F11RQ9Y624 299 aaKnown RBP10.35□□□□□ -0.75
SHMT2-205ENST00000553474 PEX7O00628 323 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 LIPFP07098 398 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 MYCNOSP40205 109 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 TPPP2P59282 170 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 OR5I1Q13606 314 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 TNXAQ16473 311 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 C9orf152Q5JTZ5 239 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 ZNF329Q86UD4 541 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 LY6G5BQ8NDX9 201 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 CMTM2Q8TAZ6 248 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 ITLN2Q8WWU7 325 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-205ENST00000553474 RPEQ96AT9 228 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 FXYD5Q96DB9 178 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 RAB1BQ9H0U4 201 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 LRRK2Q5S007 2527 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 SNURFLB1AK76 121 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 CBLN1P23435 193 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 PCP4P48539 62 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 COTL1Q14019 142 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 C21orf62-AS1Q17RA5 79 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 OR10J3Q5JRS4 329 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 OR8I2Q8N0Y5 310 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms