RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TSPAN4O14817 238 aa13.87□□□□□ -0.19
CPSF2-202ENST00000553427 SCAF4O95104 1147 aaKnown RBP13.87□□□□□ -0.19
CPSF2-202ENST00000553427 OR10J1P30954 320 aa13.87□□□□□ -0.19
CPSF2-202ENST00000553427 BMI1P35226 326 aa13.87□□□□□ -0.19
CPSF2-202ENST00000553427 DEFA1P59665 94 aa13.87□□□□□ -0.19
CPSF2-202ENST00000553427 DEFA3P59666 94 aa13.87□□□□□ -0.19
CPSF2-202ENST00000553427 YPEL3P61236 119 aaPredicted RBP13.87□□□□□ -0.19
CPSF2-202ENST00000553427 ZBTB8BQ8NAP8 495 aaPredicted RBP13.87□□□□□ -0.19
CPSF2-202ENST00000553427 SPAG8Q99932 426 aaPredicted RBP13.87□□□□□ -0.19
CPSF2-202ENST00000553427 C19orf73Q9NVV2 129 aa13.87□□□□□ -0.19
CPSF2-202ENST00000553427 TRAV14DV4A0A0A6YYC5 116 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 WRBO00258 174 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 CHEK1O14757 476 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 ZNF207O43670 478 aaKnown RBP13.86□□□□□ -0.19
CPSF2-202ENST00000553427 NHLRC4P0CG21 123 aaPredicted RBP13.86□□□□□ -0.19
CPSF2-202ENST00000553427 IGHV4-30-4P0DP06 118 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 POLR2GP62487 172 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPSF2-202ENST00000553427 GUCA2BQ16661 112 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 TIGITQ495A1 244 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 LAMTOR1Q6IAA8 161 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 RBPMS2Q6ZRY4 209 aaKnown RBP13.86□□□□□ -0.19
CPSF2-202ENST00000553427 C12orf45Q8N5I9 185 aaPredicted RBP13.86□□□□□ -0.19
CPSF2-202ENST00000553427 NPIPB3Q92617 1050 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 NEURL2Q9BR09 285 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 RHPN1-AS1Q9BWJ2 59 aa13.86□□□□□ -0.19
CPSF2-202ENST00000553427 PRSS46E5RG02 174 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 CD5P06127 495 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 FRMD6-AS1P0C7T7 363 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 CD81P60033 236 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 NRARPQ7Z6K4 114 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 ACY3Q96HD9 319 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 SLC35E1Q96K37 410 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 VSIRQ9H7M9 311 aa13.85□□□□□ -0.19
CPSF2-202ENST00000553427 STRAPQ9Y3F4 350 aaKnown RBP13.85□□□□□ -0.19
CPSF2-202ENST00000553427 PRAF2O60831 178 aa13.84□□□□□ -0.19
CPSF2-202ENST00000553427 TAS2R30P59541 319 aa13.84□□□□□ -0.19
CPSF2-202ENST00000553427 GAMTQ14353 236 aa13.84□□□□□ -0.19
CPSF2-202ENST00000553427 SMIM8Q96KF7 97 aa13.84□□□□□ -0.19
CPSF2-202ENST00000553427 RAB40CQ96S21 281 aa13.84□□□□□ -0.19
CPSF2-202ENST00000553427 HUWE1Q7Z6Z7 4374 aaKnown RBP13.83□□□□□ -0.19
CPSF2-202ENST00000553427 SSSCA1O60232 199 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 TOMM40O96008 361 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 CD7P09564 240 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 CRYBB3P26998 211 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 SPANXN5Q5MJ07 72 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 Q8WTZ3 238 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 METTL26Q96S19 204 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 RNF2Q99496 336 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 MARVELD1Q9BSK0 173 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 TMEM231Q9H6L2 316 aa13.83□□□□□ -0.2
CPSF2-202ENST00000553427 GPN1Q9HCN4 374 aaPredicted RBP13.83□□□□□ -0.2
CPSF2-202ENST00000553427 RCL1Q9Y2P8 373 aaKnown RBP13.83□□□□□ -0.2
CPSF2-202ENST00000553427 SNRPGP15A8MWD9 76 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 CCSO14618 274 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 TSC22D2O75157 780 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 NPPCP23582 126 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 FAM90A2PQ658T7 463 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 PSENENQ9NZ42 101 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 SELENOKQ9Y6D0 94 aa13.82□□□□□ -0.2
CPSF2-202ENST00000553427 IGKV1D-37A0A075B6S9 117 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 A0A1W2PS18 150 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 INMT-MINDY4F8WBC2 141 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 H3BP45 60 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 MBPP02686 304 aaPredicted RBP13.81□□□□□ -0.2
CPSF2-202ENST00000553427 RD3LP0DJH9 198 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 PAX9P55771 341 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 TMEM14EPQ6UXP3 125 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 THAP8Q8NA92 274 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 ST8SIA2Q92186 375 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 C2orf50Q96LR7 162 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 FAM110AQ9BQ89 295 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 PAIP2BQ9ULR5 123 aaKnown RBP13.81□□□□□ -0.2
CPSF2-202ENST00000553427 U3KQE9 123 aa13.81□□□□□ -0.2
CPSF2-202ENST00000553427 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 OR4C46A6NHA9 309 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 FABP1P07148 127 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 SBSPONQ8IVN8 264 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 NARS2Q96I59 477 aaKnown RBP13.8□□□□□ -0.2
CPSF2-202ENST00000553427 TRGV9Q99603 122 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 TUBA4BQ9H853 241 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 STAB2Q8WWQ8 2551 aa13.8□□□□□ -0.2
CPSF2-202ENST00000553427 C5orf51A6NDU8 294 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 ZFP92A6NM28 416 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 PMS2P5A8MQ11 134 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 FAM25EA8MYX2 175 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 OR11H12B2RN74 326 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 APOHP02749 345 aaPredicted RBP13.79□□□□□ -0.2
CPSF2-202ENST00000553427 PSG1P11464 419 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 GSG1LQ6UXU4 331 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 LINC00322Q6ZN03 302 aaPredicted RBP13.79□□□□□ -0.2
CPSF2-202ENST00000553427 ACOT7LQ6ZUV0 252 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 OR51G1Q8NGK1 321 aa13.79□□□□□ -0.2
CPSF2-202ENST00000553427 IGHV3OR16-13A0A075B7E8 117 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 IGHV3-74A0A0B4J1X5 117 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 FNDC10F2Z333 226 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 IL4P05112 153 aa13.78□□□□□ -0.2
CPSF2-202ENST00000553427 HNRNPCP07910 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms