RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 LYRM2Q9NU23 88 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-209ENST00000553280 KIF1BO60333 1816 aa2.07□□□□□ -2.08
SCFD1-209ENST00000553280 ZFHX2Q9C0A1 2572 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-209ENST00000553280 KIAA2026Q5HYC2 2103 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 AKR1C3P42330 323 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 TAS2R41P59536 307 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 Q1T7F1 81 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 RRN3P1Q2M238 152 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 SERPINI1Q99574 410 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 SH3BGRL3Q9H299 93 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 MED29Q9NX70 200 aa2.06□□□□□ -2.08
SCFD1-209ENST00000553280 TRIOBPQ9H2D6 2365 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 IGKV1D-42A0A075B6H8 117 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 F8W036 122 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 NDUFC2O95298 119 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 GPX1P07203 203 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 FKBP2P26885 142 aaKnown RBP2.05□□□□□ -2.08
SCFD1-209ENST00000553280 RNASE4P34096 147 aaKnown RBP2.05□□□□□ -2.08
SCFD1-209ENST00000553280 GNG5P63218 68 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 TSNQ15631 228 aaKnown RBP2.05□□□□□ -2.08
SCFD1-209ENST00000553280 AKR1C8PQ5T2L2 129 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 SMIM20Q8N5G0 67 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 SLAMF6Q96DU3 332 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 BOLA2Q9H3K6 86 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 SS18L2Q9UHA2 77 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 STRCQ7RTU9 1775 aa2.05□□□□□ -2.08
SCFD1-209ENST00000553280 FUOMA2VDF0 154 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 C7orf71A4D174 169 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 H7C1C5 153 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 AIPO00170 330 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 PHBP35232 272 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 LCN6P62502 163 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 SPANXN5Q5MJ07 72 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 OR13D1Q8NGV5 346 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 AQP3Q92482 292 aa2.04□□□□□ -2.08
SCFD1-209ENST00000553280 DOCK3Q8IZD9 2030 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 RGS12O14924 1447 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 UBBP0CG47 229 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 SRP14P37108 136 aaKnown RBP2.03□□□□□ -2.08
SCFD1-209ENST00000553280 CRYBA4P53673 196 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 EIF5AP63241 154 aaKnown RBP2.03□□□□□ -2.08
SCFD1-209ENST00000553280 TRIQKQ629K1 86 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 EXOC3-AS1Q8N2X6 119 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 STAG3L4Q8TBR4 150 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 ZNF625Q96I27 306 aaPredicted RBP2.03□□□□□ -2.08
SCFD1-209ENST00000553280 TRABDQ9H4I3 376 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 ACER3Q9NUN7 267 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 NHP2Q9NX24 153 aaKnown RBP2.03□□□□□ -2.08
SCFD1-209ENST00000553280 TAS2R4Q9NYW5 299 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 SSR3Q9UNL2 185 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 UFC1Q9Y3C8 167 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 V9GYQ6 96 aa2.03□□□□□ -2.08
SCFD1-209ENST00000553280 ECM29Q5VYK3 1845 aa2.03□□□□□ -2.09
SCFD1-209ENST00000553280 SETD5Q9C0A6 1442 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 MDC1Q14676 2089 aaKnown RBP2.02□□□□□ -2.09
SCFD1-209ENST00000553280 PTPRBP23467 1997 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 SCN10AQ9Y5Y9 1956 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 J3QKU1 62 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 TAX1BP3O14907 124 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 MFSD11O43934 449 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 BANF1O75531 89 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 CRPP02741 224 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 FABP1P07148 127 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 ZNF705BP0CI00 300 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-209ENST00000553280 TCTAP57738 103 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 ZNF846Q147U1 533 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 BCL2L15Q5TBC7 163 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 C3orf33Q6P1S2 294 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 FP248Q71RG6 208 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-209ENST00000553280 LYSMD1Q96S90 227 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 BIN3Q9NQY0 253 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 ZNF106Q9H2Y7 1883 aaKnown RBP2.02□□□□□ -2.09
SCFD1-209ENST00000553280 COL5A3P25940 1745 aaPredicted RBP2.02□□□□□ -2.09
SCFD1-209ENST00000553280 SYNMO15061 1565 aa2.02□□□□□ -2.09
SCFD1-209ENST00000553280 SERPINB1P30740 379 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 NUMA1Q14980 2115 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 SCGB2B2Q4G0G5 96 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 GRINAQ7Z429 371 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 LINC00471Q8N535 108 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 OR2T10Q8NGZ9 312 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 Q96M85 177 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 YPEL2Q96QA6 119 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 SELENOSQ9BQE4 189 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 SLC50A1Q9BRV3 221 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 TMEM70Q9BUB7 260 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 PBDC1Q9BVG4 233 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 PBOV1Q9GZY1 135 aa2.01□□□□□ -2.09
SCFD1-209ENST00000553280 UHRF1BP1Q6BDS2 1440 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 PCNX2A6NKB5 2137 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 TRGV2A0A075B6R0 118 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 OR2T1O43869 369 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 GGCTO75223 188 aaKnown RBP2□□□□□ -2.09
SCFD1-209ENST00000553280 MIFP14174 115 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 C22orf39Q6P5X5 142 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 ZHX1-C8orf76Q96EF9 292 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 ATPIF1Q9UII2 106 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 SLC35A3Q9Y2D2 325 aa2□□□□□ -2.09
SCFD1-209ENST00000553280 PLXND1Q9Y4D7 1925 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 TRGV10A0A0A0MS01 117 aa1.99□□□□□ -2.09
SCFD1-209ENST00000553280 TRAV1-1A0A0B4J248 108 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms