RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 UBE2CO00762 179 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 CLN5O75503 358 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 DFFBO76075 338 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 HTR2BP41595 481 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 RPL11P62913 178 aaKnown RBP11.75□□□□□ -0.53
CDK4-215ENST00000553237 BSXQ3C1V8 233 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 Q6ZWC4 215 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 LRTM2Q8N967 370 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 OR4X1Q8NH49 305 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 VSIRQ9H7M9 311 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 CACFD1Q9UGQ2 172 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 RYR2Q92736 4967 aa11.75□□□□□ -0.53
CDK4-215ENST00000553237 DUXBA0A1W2PPF3 345 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 BMI1P35226 326 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 CMC4P56277 68 aaPredicted RBP11.74□□□□□ -0.53
CDK4-215ENST00000553237 UBE2MP61081 183 aaKnown RBP11.74□□□□□ -0.53
CDK4-215ENST00000553237 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 TNFRSF9Q07011 255 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 TIGITQ495A1 244 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 CCDC32Q9BV29 185 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 HSPB7Q9UBY9 170 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 SACSQ9NZJ4 4579 aa11.74□□□□□ -0.53
CDK4-215ENST00000553237 KIR2DL5BA0A0G2JN68 375 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 KIR2DL5BA0A0G2JPC4 375 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 A0A0J9YWU9 116 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 C9orf170A2RU37 121 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
CDK4-215ENST00000553237 LYRM1O43325 122 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 ANXA7P20073 488 aaKnown RBP11.73□□□□□ -0.53
CDK4-215ENST00000553237 NPPCP23582 126 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 KIR2DL5AQ8N109 375 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 OR1S1Q8NH92 325 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 S100ZQ8WXG8 99 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 MS4A6AQ9H2W1 248 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 PTTG2Q9NZH5 202 aa11.73□□□□□ -0.53
CDK4-215ENST00000553237 RPS10-NUDT3A0A1W2PQS6 291 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 IGKV1-17P01599 117 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 HOXB5P09067 269 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 OR4E1P0C645 316 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDK4-215ENST00000553237 C2orf83Q53S99 150 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 LYG2Q86SG7 212 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 SLC24A4Q8NFF2 622 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 RNF183Q96D59 192 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 METTL26Q96S19 204 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 RBKSQ9H477 322 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 BATF3Q9NR55 127 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 LYSTQ99698 3801 aa11.72□□□□□ -0.53
CDK4-215ENST00000553237 PITX3O75364 302 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 SCGB2A1O75556 95 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 CD5P06127 495 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 SLC25A6P12236 298 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 RND2P52198 227 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 DEFB131AP59861 70 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 DHRS2Q13268 280 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 PMS2P11Q13670 270 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 C4orf46Q504U0 113 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 GGNBP1Q5YKI7 109 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 PRSS54Q6PEW0 395 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 FAM24BQ8N5W8 94 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 DTD1Q8TEA8 209 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 TMEM170AQ8WVE7 144 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 CSTL1Q9H114 145 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 TMEM231Q9H6L2 316 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 RABAC1Q9UI14 185 aa11.71□□□□□ -0.53
CDK4-215ENST00000553237 TRAV30A0A087WSZ9 112 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 A0A1W2PS18 150 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 JTBO76095 146 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 IFNA10P01566 189 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 NPY1RP25929 384 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 CRYBB3P26998 211 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 COQ8AQ8NI60 647 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 RNASEH2CQ8TDP1 164 aaKnown RBP11.7□□□□□ -0.54
CDK4-215ENST00000553237 U3KQ87 197 aa11.7□□□□□ -0.54
CDK4-215ENST00000553237 CXorf65A6NEN9 183 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 MPTX1A8MV57 137 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 ADAP1O75689 374 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 TCRBP04435 133 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 SLC25A4P12235 298 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 OR10J1P30954 320 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 P2RY1P47900 373 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 NOXA1Q86UR1 476 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 Q8WTZ3 238 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 NPIPB3Q92617 1050 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 ACY3Q96HD9 319 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 C20orf85Q9H1P6 137 aa11.69□□□□□ -0.54
CDK4-215ENST00000553237 ZNF846Q147U1 533 aa11.68□□□□□ -0.54
CDK4-215ENST00000553237 ETFRF1Q6IPR1 90 aa11.68□□□□□ -0.54
CDK4-215ENST00000553237 NARS2Q96I59 477 aaKnown RBP11.68□□□□□ -0.54
CDK4-215ENST00000553237 WDR12Q9GZL7 423 aaKnown RBP11.68□□□□□ -0.54
CDK4-215ENST00000553237 TBC1D24Q9ULP9 559 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms