RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 FANCMQ8IYD8 2048 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 SYNJ1O43426 1573 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 TRAV27A0A087WT01 109 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 A0A087X0T9 212 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 IGKV1-9A0A0C4DH69 117 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 ZNF727A8MUV8 499 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 A8MWV9 139 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 LEPROTO15243 131 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 NDUFB3O43676 98 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 CRHBPP24387 322 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 RPL27AP46776 148 aaKnown RBP4.29□□□□□ -1.72
VPS29-210ENST00000552130 DYNLT3P51808 116 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 ARPP19P56211 112 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 QRFPP83859 136 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 RPL36AP83881 106 aaKnown RBP4.29□□□□□ -1.72
VPS29-210ENST00000552130 RPL18Q07020 188 aaKnown RBP4.29□□□□□ -1.72
VPS29-210ENST00000552130 DIAPH2-AS1Q14236 149 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 SPANXN3Q5MJ09 141 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 ZNF880Q6PDB4 577 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 LCN15Q6UWW0 184 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 ZNF767PQ75MW2 155 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 OR10AC1Q8NH08 325 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 NAT14Q8WUY8 206 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 YPEL2Q96QA6 119 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 GABARAPL1Q9H0R8 117 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 SNX12Q9UMY4 172 aa4.29□□□□□ -1.72
VPS29-210ENST00000552130 IGHV1-3A0A0C4DH29 117 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 TRBV27A0A0K0K1C4 114 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 A0A1W2PP18 115 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 A8MWP6 167 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 NDUFB2O95178 105 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 KRASP01116 189 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 HSD52Q0P140 79 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 SYCNQ0VAF6 134 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 C4orf33Q8N1A6 199 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 POM121L12Q8N7R1 296 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 OR5H6Q8NGV6 325 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 RHOXF1Q8NHV9 184 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 LINC00479Q96M42 142 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 FER1L6Q2WGJ9 1857 aa4.28□□□□□ -1.72
VPS29-210ENST00000552130 DENND4CQ5VZ89 1909 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 ANKRD12Q6UB98 2062 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 A0A0G2JMM0 328 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 KLF18A0A0U1RQI7 1052 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 A0A1W2PPB8 328 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 TMEM223A0PJW6 202 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 KIR3DP1A8MWS1 328 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 H7C423 109 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 C19orf84I3L1E1 186 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 HRASP01112 189 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 C1QAP02745 245 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 TCRAP04437 139 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 IGHV3-30-3P0DP02 117 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 HIST1H1DP16402 221 aaKnown RBP4.27□□□□□ -1.73
VPS29-210ENST00000552130 HLA-DMBP28068 263 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
VPS29-210ENST00000552130 C22orf39Q6P5X5 142 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 RPS19BP1Q86WX3 136 aaKnown RBP4.27□□□□□ -1.73
VPS29-210ENST00000552130 BPIFA4PQ86YQ2 179 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 ZFP62Q8NB50 900 aaPredicted RBP4.27□□□□□ -1.73
VPS29-210ENST00000552130 C11orf1Q9H5F2 150 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 XAGE1AQ9HD64 81 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 DSCAMO60469 2012 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 KIAA1671Q9BY89 1806 aa4.27□□□□□ -1.73
VPS29-210ENST00000552130 ZNF638Q14966 1978 aaKnown RBP4.26□□□□□ -1.73
VPS29-210ENST00000552130 IGLV3-10A0A075B6K4 115 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 IGHV3-64DA0A0J9YX35 117 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 A6NED7 52 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 CDC42EP2O14613 210 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 IGHV1-46P01743 117 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 RNASE4P34096 147 aaKnown RBP4.26□□□□□ -1.73
VPS29-210ENST00000552130 ZNF93P35789 620 aaPredicted RBP4.26□□□□□ -1.73
VPS29-210ENST00000552130 TPPP2P59282 170 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 ADM2Q7Z4H4 148 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 GKN2Q86XP6 184 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 ZNF101Q8IZC7 436 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 APCDD1LQ8NCL9 501 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 CIB3Q96Q77 187 aaPredicted RBP4.26□□□□□ -1.73
VPS29-210ENST00000552130 PLA2G2FQ9BZM2 168 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 OSTCQ9NRP0 149 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 ZNRD1Q9P1U0 126 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 UBR2Q8IWV8 1755 aa4.26□□□□□ -1.73
VPS29-210ENST00000552130 COL5A2P05997 1499 aaPredicted RBP4.25□□□□□ -1.73
VPS29-210ENST00000552130 TDRD6O60522 2096 aaKnown RBP4.25□□□□□ -1.73
VPS29-210ENST00000552130 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 C7orf71A4D174 169 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 A6NDX4 124 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 A8MWP4 228 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 K7ERJ3 54 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 HIST1H2BKO60814 126 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 HIST1H2BJP06899 126 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 CFC1P0CG37 223 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 CCL3P10147 92 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 BTG2P78543 158 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 MYL5Q02045 173 aa4.25□□□□□ -1.73
VPS29-210ENST00000552130 IZUMO2Q6UXV1 221 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms