RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 ALG5Q9Y673 324 aa7.33□□□□□ -1.24
SLC48A1-209ENST00000552003 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 DEFB131BA0A096LNP1 70 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 A0A0B4J293 547 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 SSNA1O43805 119 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 GGCTO75223 188 aaKnown RBP7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 KBTBD11O94819 623 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 KRASP01116 189 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 IFNA21P01568 189 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 IGKV1-39P01597 117 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 IGHV3-23P01764 117 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 IGKV1D-39P04432 117 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 SAA1P0DJI8 122 aaPredicted RBP7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 G6PCP35575 357 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 ATP5G2Q06055 141 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 OR4A47Q6IF82 309 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 H2BFWTQ7Z2G1 175 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 CADM3Q8N126 398 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 SLC35G3Q8N808 338 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 TEX45Q8NA69 505 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 LSM10Q969L4 123 aaKnown RBP7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 SEC22AQ96IW7 307 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 OR2A7Q96R45 310 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 TMEM140Q9NV12 185 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 BET1LQ9NYM9 111 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 PRR13Q9NZ81 148 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 TMED3Q9Y3Q3 217 aa7.32□□□□□ -1.24
SLC48A1-209ENST00000552003 ZNF320A2RRD8 509 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 SNAPC5O75971 98 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 IGKV1-5P01602 117 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 FGF2P09038 288 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 THOC7Q6I9Y2 204 aaKnown RBP7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 RBPMS2Q6ZRY4 209 aaKnown RBP7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 SSX9Q7RTT3 188 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 LYZL2Q7Z4W2 148 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 MMD2Q8IY49 270 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 VKORC1L1Q8N0U8 176 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 PUSL1Q8N0Z8 303 aaKnown RBP7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 TMEM167AQ8TBQ9 72 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 ZNF503Q96F45 646 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 TMEM68Q96MH6 324 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 SPIN2AQ99865 258 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 SPAG8Q99932 426 aaPredicted RBP7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 SPIN2BQ9BPZ2 258 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 NDUFAF3Q9BU61 184 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 S4R3C0 116 aa7.31□□□□□ -1.24
SLC48A1-209ENST00000552003 FAM223BA6NKX1 122 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 DBX1A6NMT0 343 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 SRRM4A7MD48 611 aaKnown RBP7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 TSPAN4O14817 238 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 OR2J3O76001 311 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 ACTL6BO94805 426 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 HOXB5P09067 269 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 GIG44P09565 113 aaPredicted RBP7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 OR9G9P0C7N8 305 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 P0C879 139 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 SLC25A6P12236 298 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 ADMP35318 185 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 MAS1LP35410 378 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 C15orf32Q32M92 178 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 NMSQ5H8A3 153 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 GGNBP1Q5YKI7 109 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 Q6ZNX1 250 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 FAM223AQ8IWN6 122 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 OR4A16Q8NH70 328 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 MED28Q9H204 178 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 FKBP11Q9NYL4 201 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 CACFD1Q9UGQ2 172 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 PRNDQ9UKY0 176 aa7.3□□□□□ -1.24
SLC48A1-209ENST00000552003 A0A1B0GU03 582 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 C15orf61A6NNL5 157 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 UPK2O00526 184 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 GOSR2O14653 212 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 ADAP1O75689 374 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 SULT1A3P0DMM9 295 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 SULT1A4P0DMN0 295 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 RPL8P62917 257 aaKnown RBP7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 LRP2P98164 4655 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 SMCO1Q147U7 214 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 PRSS8Q16651 343 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 CLEC19AQ6UXS0 136 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 GSG1LQ6UXU4 331 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 UBE2DNLQ8IWF7 75 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 PDCD10Q9BUL8 212 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 ZNF430Q9H8G1 570 aaPredicted RBP7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 CACNG5Q9UF02 275 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 X6R8D5 127 aa7.29□□□□□ -1.24
SLC48A1-209ENST00000552003 A0A0G2JRQ6 117 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 C5orf51A6NDU8 294 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 FAM25EA8MYX2 175 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 CCSO14618 274 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 CA1P00915 261 aaPredicted RBP7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 IFNA17P01571 189 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 IL6RP08887 468 aaPredicted RBP7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 HLA-GP17693 338 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 FUSP35637 526 aaKnown RBP eCLIP7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 OR2B8PP59922 312 aa7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 RRAS2P62070 204 aaPredicted RBP7.28□□□□□ -1.24
SLC48A1-209ENST00000552003 TNXAQ16473 311 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms