RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 RNF183Q96D59 192 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 TP53TG1Q9Y2A0 90 aa9.58□□□□□ -0.88
NPAS3-209ENST00000551008 CEBPZOSA8MTT3 80 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 SPRY2O43597 315 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 NPY1RP25929 384 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 APOC4P55056 127 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 SMCO1Q147U7 214 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 RBMS2Q15434 407 aaKnown RBP9.57□□□□□ -0.88
NPAS3-209ENST00000551008 PYDC2Q56P42 97 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 RNASEH2CQ8TDP1 164 aaKnown RBP9.57□□□□□ -0.88
NPAS3-209ENST00000551008 SDHCQ99643 169 aaPredicted RBP9.57□□□□□ -0.88
NPAS3-209ENST00000551008 SRRQ9GZT4 340 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 RBKSQ9H477 322 aa9.57□□□□□ -0.88
NPAS3-209ENST00000551008 A0A0J9YWU9 116 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 K7EQG2 157 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 UBE2CO00762 179 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 CCR6P51684 374 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 USF2Q15853 346 aaPredicted RBP9.56□□□□□ -0.88
NPAS3-209ENST00000551008 LYG2Q86SG7 212 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 IL17DQ8TAD2 202 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 SCGB3A2Q96PL1 93 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 KCNIP3Q9Y2W7 256 aa9.56□□□□□ -0.88
NPAS3-209ENST00000551008 TRAV2A0A0B4J234 112 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 RPS10-NUDT3A0A1W2PQS6 291 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 CCDC160A6NGH7 325 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 ZNF701M0R085 212 aaPredicted RBP9.55□□□□□ -0.88
NPAS3-209ENST00000551008 GIG44P09565 113 aaPredicted RBP9.55□□□□□ -0.88
NPAS3-209ENST00000551008 SLC25A4P12235 298 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 OR10J1P30954 320 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 P2RY1P47900 373 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 DEFB131AP59861 70 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 YPEL3P61236 119 aaPredicted RBP9.55□□□□□ -0.88
NPAS3-209ENST00000551008 PPP1R1AQ13522 171 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 BAK1Q16611 211 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 TMED4Q7Z7H5 227 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 LGI3Q8N145 548 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 TOMM5Q8N4H5 51 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 LRTM2Q8N967 370 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 OR1S2Q8NGQ3 325 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 DTD1Q8TEA8 209 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 DCANP1Q8TF63 244 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 GLMPQ8WWB7 406 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
NPAS3-209ENST00000551008 IGKV1D-37A0A075B6S9 117 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 TRAV30A0A087WSZ9 112 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 NPPCP23582 126 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 BMI1P35226 326 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 FAUP35544 74 aaKnown RBP9.54□□□□□ -0.88
NPAS3-209ENST00000551008 TMEM128Q5BJH2 165 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 LEMD1Q68G75 181 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 STPG3Q8N7X2 389 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 METTL26Q96S19 204 aa9.54□□□□□ -0.88
NPAS3-209ENST00000551008 LCE2BO14633 110 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 CD5P06127 495 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 BTCP35070 178 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 AP3S2P59780 193 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 SRPXP78539 464 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 ACY3Q96HD9 319 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 CSTL1Q9H114 145 aa9.53□□□□□ -0.88
NPAS3-209ENST00000551008 DUXBA0A1W2PPF3 345 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 SFT2D2O95562 160 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 TOMM40O96008 361 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 IFNA10P01566 189 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 PSG1P11464 419 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 VAMP1P23763 118 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 S100A5P33763 92 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.89
NPAS3-209ENST00000551008 GAMTQ14353 236 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 STXBP6Q8NFX7 210 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 DEDD2Q8WXF8 326 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 GRAMD2BQ96HH9 432 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 SLC25A21Q9BQT8 299 aaPredicted RBP9.52□□□□□ -0.89
NPAS3-209ENST00000551008 TMEM231Q9H6L2 316 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 RABAC1Q9UI14 185 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 U3KQ87 197 aa9.52□□□□□ -0.89
NPAS3-209ENST00000551008 EPPK1P58107 5090 aaKnown RBP9.52□□□□□ -0.89
NPAS3-209ENST00000551008 IGKV1OR2-108A0A075B7D4 117 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 A0A1W2PS18 150 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 MPTX1A8MV57 137 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 DNASE2O00115 360 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-209ENST00000551008 IL4P05112 153 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPAS3-209ENST00000551008 ZNF688P0C7X2 276 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 IAPPP10997 89 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 SLC25A6P12236 298 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 ANXA3P12429 323 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 C4BPBP20851 252 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
NPAS3-209ENST00000551008 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 TRPT1Q86TN4 253 aaKnown RBP9.51□□□□□ -0.89
NPAS3-209ENST00000551008 OR1S1Q8NH92 325 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 CACFD1Q9UGQ2 172 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 FLVCR2Q9UPI3 526 aa9.51□□□□□ -0.89
NPAS3-209ENST00000551008 KMT2AQ03164 3969 aa9.5□□□□□ -0.89
NPAS3-209ENST00000551008 KNCNA6PVL3 124 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms