RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 ARL3P36405 182 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 VWC2Q2TAL6 325 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 TIGITQ495A1 244 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 ETFRF1Q6IPR1 90 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 THAP8Q8NA92 274 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 SLC35E1Q96K37 410 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
ERBB3-215ENST00000550828 FNDC10F2Z333 226 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 LINC01619G3V211 115 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 GNG7O60262 68 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 OR10J1P30954 320 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 NPBWR1P48145 328 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 BAXQ07812 192 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 ZNF546Q86UE3 836 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 STX12Q86Y82 276 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 LINC00482Q8N8I6 264 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 OR5C1Q8NGR4 320 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 SMIM3Q9BZL3 60 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 PKD1L1Q8TDX9 2849 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 NOTCH3Q9UM47 2321 aa10.33□□□□□ -0.76
ERBB3-215ENST00000550828 GGCTO75223 188 aaKnown RBP10.32□□□□□ -0.76
ERBB3-215ENST00000550828 CXCL2P19875 107 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 EDN2P20800 178 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 MYCNOSP40205 109 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 ZNF90Q03938 601 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 CLINT1Q14677 625 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 SPSB3Q6PJ21 355 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 UNQ9165/PRO28630Q6UXU0 137 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 TMEM182Q6ZP80 229 aaPredicted RBP10.32□□□□□ -0.76
ERBB3-215ENST00000550828 TMEM144Q7Z5S9 345 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 OR1S2Q8NGQ3 325 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
ERBB3-215ENST00000550828 RCC1LQ96I51 464 aaKnown RBP10.32□□□□□ -0.76
ERBB3-215ENST00000550828 TMEM147Q9BVK8 224 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 GGACTQ9BVM4 153 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 FBXL17Q9UF56 701 aa10.32□□□□□ -0.76
ERBB3-215ENST00000550828 LSM4Q9Y4Z0 139 aaKnown RBP10.32□□□□□ -0.76
ERBB3-215ENST00000550828 IGHV3OR16-8A0A075B7F1 116 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 UBE2L5PA0A1B0GUS4 154 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 SMCO3A2RU48 225 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 ARPC5O15511 151 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 C1QBP02746 253 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 S100A11P31949 105 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 SYNJ2BPP57105 145 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 AKR1C1Q04828 323 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
ERBB3-215ENST00000550828 FAM209BQ5JX69 171 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 LILRB2Q8N423 598 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 OR4F17Q8NGA8 305 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 DPF1Q92782 380 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 OR4F4Q96R69 305 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 MGST2Q99735 147 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 ZFAND3Q9H8U3 227 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 UQCC1Q9NVA1 299 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 WDR83OSQ9Y284 106 aa10.31□□□□□ -0.76
ERBB3-215ENST00000550828 HMSDA8MTL9 139 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 M0QZ24 198 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 NUPL2O15504 423 aaKnown RBP10.3□□□□□ -0.76
ERBB3-215ENST00000550828 ZP3P21754 424 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 HBG1P69891 147 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 HBG2P69892 147 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 RPEL1Q2QD12 228 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 TRGV9Q99603 122 aa10.3□□□□□ -0.76
ERBB3-215ENST00000550828 GAR1Q9NY12 217 aaKnown RBP10.3□□□□□ -0.76
ERBB3-215ENST00000550828 ZFP92A6NM28 416 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 SCAF4O95104 1147 aaKnown RBP10.29□□□□□ -0.76
ERBB3-215ENST00000550828 PF4P02776 101 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 GATA2P23769 480 aaPredicted RBP10.29□□□□□ -0.76
ERBB3-215ENST00000550828 AP2S1P53680 142 aaPredicted RBP10.29□□□□□ -0.76
ERBB3-215ENST00000550828 YPEL3P61236 119 aaPredicted RBP10.29□□□□□ -0.76
ERBB3-215ENST00000550828 DEFA6Q01524 100 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 OR2F1Q13607 317 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 ATP6V1FQ16864 119 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 TOMM20LQ6UXN7 152 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 IL34Q6ZMJ4 242 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 ADAMTSL5Q6ZMM2 481 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 ZNF600Q6ZNG1 722 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 REC114Q7Z4M0 266 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 GPHB5Q86YW7 130 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 TMEM190Q8WZ59 177 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 ATP5SQ99766 215 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 GGTLC1Q9BX51 225 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 MFFQ9GZY8 342 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 NPVFQ9HCQ7 196 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 PUS1Q9Y606 427 aaKnown RBP eCLIP10.29□□□□□ -0.76
ERBB3-215ENST00000550828 RFNGQ9Y644 331 aa10.29□□□□□ -0.76
ERBB3-215ENST00000550828 TGP01266 2768 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 TRAV30A0A087WSZ9 112 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 TMEM213A2RRL7 107 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 NDUFA4O00483 81 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 TOMM40O96008 361 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 PSG1P11464 419 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 FGF7P21781 194 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 EIF2B2P49770 351 aaKnown RBP10.28□□□□□ -0.76
ERBB3-215ENST00000550828 BTNL8Q6UX41 500 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 CYP2G1PQ6ZSU1 146 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 C1QL4Q86Z23 238 aa10.28□□□□□ -0.76
ERBB3-215ENST00000550828 KCNRGQ8N5I3 272 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms