RNA–Protein interactions for RNA: ENST00000550558.5

ASIC1-206, Transcript of acid sensing ion channel subunit 1, human

TSL 2

Gene ASIC1, Length 3,819 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC1-206	ENST00000550558	TEX38	Q6PEX7	206 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	GOLT1A	Q6ZVE7	132 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	ZNF596	Q8TC21	504 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	PGLYRP4	Q96LB8	373 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	NAV2	Q8IVL1	2488 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	DSCAM	O60469	2012 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	IGHV3-66	A0A0C4DH42	116 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	HIGD1A	Q9Y241	93 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	ARL2-SNX15	V9GYD0	113 aa		13.75	□□□□□ -0.21
ASIC1-206	ENST00000550558	NDUFA2	O43678	99 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	SCGB2A1	O75556	95 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	VENTX	O95231	258 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	VDAC2	P45880	294 aa	Predicted RBP	13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	TMEM133	Q9H2Q1	129 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	ADM	P35318	185 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	CEACAM3	P40198	252 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	SLC25A48	Q6ZT89	311 aa	Known RBP	13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	CLEC5A	Q9NY25	188 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	FOXA2	Q9Y261	457 aa	Predicted RBP	13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	COL5A1	P20908	1838 aa	Predicted RBP	13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558		H0YJW9	148 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	NBEAP1	P0C6P0	100 aa		13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	NOL4L	Q96MY1	436 aa	Predicted RBP	13.74	□□□□□ -0.21
ASIC1-206	ENST00000550558	AMBP	P02760	352 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	IL4	P05112	153 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	DMXL2	Q8TDJ6	3036 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	TRBV24-1	A0A075B6N3	115 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	TIMM23	O14925	209 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	APCS	P02743	223 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	MEF2C	Q06413	473 aa	Predicted RBP	13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	DDT	P30046	118 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	CCKAR	P32238	428 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	ZNF672	Q499Z4	452 aa	Predicted RBP	13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	SCRT1	Q9BWW7	348 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	AKAP13	Q12802	2813 aa		13.73	□□□□□ -0.21
ASIC1-206	ENST00000550558	IGHV1-8	P0DP01	117 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	TMEM177	Q53S58	311 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	IGFL2	Q6UWQ7	119 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	NEU1	Q99519	415 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	IGLV3-9	A0A075B6K5	115 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	ZNF207	O43670	478 aa	Known RBP	13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	CEACAM8	P31997	349 aa	Predicted RBP	13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	AAMDC	Q9H7C9	122 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	DMXL1	Q9Y485	3027 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	TRAV8-1	A0A0A6YYK1	113 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	LIPF	P07098	398 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	NPPC	P23582	126 aa		13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	SRSF12	Q8WXF0	261 aa	Known RBP	13.72	□□□□□ -0.21
ASIC1-206	ENST00000550558	LOC105371242	A0A075B767	164 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	SERF1A	O75920	110 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	SELENOT	P62341	195 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	PPP1R27	Q86WC6	154 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	WNT10A	Q9GZT5	417 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558		M0R2Z0	102 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	OR2J3	O76001	311 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	RNASE2	P10153	161 aa	Known RBP	13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	SSBP2	P81877	361 aa	Predicted RBP	13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	TCF24	Q7RTU0	167 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	ATM	Q13315	3056 aa		13.71	□□□□□ -0.21
ASIC1-206	ENST00000550558	CLEC3B	P05452	202 aa		13.71	□□□□□ -0.22
ASIC1-206	ENST00000550558	LGALS7	P47929	136 aa		13.71	□□□□□ -0.22
ASIC1-206	ENST00000550558	PKIA	P61925	76 aa		13.71	□□□□□ -0.22
ASIC1-206	ENST00000550558	OR52E5	Q8NH55	327 aa		13.71	□□□□□ -0.22
ASIC1-206	ENST00000550558	LINC00527	Q9UJ94	153 aa		13.71	□□□□□ -0.22
ASIC1-206	ENST00000550558	SH2D7	A6NKC9	451 aa	Predicted RBP	13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	IGHV2-26	A0A0B4J1V2	119 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558		A0A1B0GV90	55 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	HSBP1L1	C9JCN9	74 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	AMY1A	P04745	511 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	PFN1	P07737	140 aa	Known RBP	13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	IGFL3	Q6UXB1	125 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	TMEM14B	Q9NUH8	114 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	IL36B	Q9NZH7	164 aa		13.7	□□□□□ -0.22
ASIC1-206	ENST00000550558	RNF2	Q99496	336 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	TXNDC17	Q9BRA2	123 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	CTSZ	Q9UBR2	303 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	WT1-AS	Q06250	92 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	ATG101	Q9BSB4	218 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	NAGK	Q9UJ70	344 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	DMRT1	Q9Y5R6	373 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	LOC389332	A0A1B0GUA5	103 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558		A0A1W2PPI3	338 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	DIRC3	C9JPN6	131 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	PEX7	O00628	323 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	IGHV2-5	P01817	119 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	GZMB	P10144	247 aa		13.69	□□□□□ -0.22
ASIC1-206	ENST00000550558	HIST1H1E	P10412	219 aa	Known RBP	13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	WDR73	Q6P4I2	378 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	TMEM170A	Q8WVE7	144 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	BET1L	Q9NYM9	111 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	DPM3	Q9P2X0	92 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	ADAMTS20	P59510	1910 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	KMT2E	Q8IZD2	1858 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558		E7EUB6	86 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	NDUFS7	O75251	213 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	EXOC3-AS1	Q8N2X6	119 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	RITA1	Q96K30	269 aa		13.68	□□□□□ -0.22
ASIC1-206	ENST00000550558	VKORC1	Q9BQB6	163 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms