RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CCDC32Q9BV29 185 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 MED29Q9NX70 200 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 KDM5BQ9UGL1 1544 aa1.35□□□□□ -2.19
CCDC38-208ENST00000549876 SETD5Q9C0A6 1442 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 TMSB15BA0A087X1C1 80 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 A0A1W2PRE2 83 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 OR51F1A6NGY5 319 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 ARL5CA6NH57 179 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 TMEM212A6NML5 194 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 FNDC10F2Z333 226 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 LY6LH3BQJ8 138 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 KPNA4O00629 521 aaPredicted RBP1.34□□□□□ -2.19
CCDC38-208ENST00000549876 CYB5BO43169 146 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 GADD45GO95257 159 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 TCL1BO95988 128 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 IGKV1-16P04430 117 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 OR10J4P0C629 311 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 CSRP1P21291 193 aaKnown RBP1.34□□□□□ -2.19
CCDC38-208ENST00000549876 SRIP30626 198 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 GLRXP35754 106 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 NDUFA5Q16718 116 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 ZNF791Q3KP31 576 aaPredicted RBP1.34□□□□□ -2.19
CCDC38-208ENST00000549876 FAM27BQ5VT28 67 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 BPIFA4PQ86YQ2 179 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 EXOC3-AS1Q8N2X6 119 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 SIGLECL1Q8N7X8 197 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 OR52R1Q8NGF1 315 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 OR9Q1Q8NGQ5 310 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 OR13D1Q8NGV5 346 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 MBD3L1Q8WWY6 194 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 MAFIPQ8WZ33 124 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 TMEM106AQ96A25 262 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 HSPB9Q9BQS6 159 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 DOHHQ9BU89 302 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 RTL8AQ9BWD3 113 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 CXCL16Q9H2A7 254 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 LRTM1Q9HBL6 345 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 OSTCQ9NRP0 149 aa1.34□□□□□ -2.19
CCDC38-208ENST00000549876 SCAF11Q99590 1463 aaKnown RBP1.34□□□□□ -2.19
CCDC38-208ENST00000549876 PLXNB1O43157 2135 aa1.34□□□□□ -2.2
CCDC38-208ENST00000549876 PTPRSQ13332 1948 aa1.34□□□□□ -2.2
CCDC38-208ENST00000549876 MYH11P35749 1972 aa1.34□□□□□ -2.2
CCDC38-208ENST00000549876 SCN9AQ15858 1988 aa1.34□□□□□ -2.2
CCDC38-208ENST00000549876 A0A087X0T9 212 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 IGKV1-9A0A0C4DH69 117 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 A0A0D9SEW6 157 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 A0A0D9SG52 128 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 MEIS3P1A6NDR6 274 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 ZNF860A6NHJ4 632 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 RFPL4AA6NLU0 287 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 RFPL4AL1F8VTS6 287 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 M0QZK8 103 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 METTL15P1P0C7V9 234 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 COX6A1P12074 109 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 DEFA4P12838 97 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 EIF2B2P49770 351 aaKnown RBP1.33□□□□□ -2.2
CCDC38-208ENST00000549876 TMEM258P61165 79 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 RPS28P62857 69 aaKnown RBP1.33□□□□□ -2.2
CCDC38-208ENST00000549876 ERHP84090 104 aaKnown RBP1.33□□□□□ -2.2
CCDC38-208ENST00000549876 RELAQ04206 551 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 DEFB115Q30KQ5 88 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 Q6ZTI0 123 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 DEFB128Q7Z7B8 93 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 CROCCP2Q86T23 111 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 TMEM86AQ8N2M4 240 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 OR4X2Q8NGF9 303 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 OR8D4Q8NGM9 314 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 GRPEL2Q8TAA5 225 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 ISOC1Q96CN7 298 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 SLAMF6Q96DU3 332 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 ADAT3Q96EY9 351 aaPredicted RBP1.33□□□□□ -2.2
CCDC38-208ENST00000549876 YPEL2Q96QA6 119 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 GINS4Q9BRT9 223 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 EFCAB11Q9BUY7 163 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 CKLFQ9UBR5 152 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 OR52A1Q9UKL2 312 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 EPDR1Q9UM22 224 aa1.33□□□□□ -2.2
CCDC38-208ENST00000549876 PLXND1Q9Y4D7 1925 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 ADGBQ8N7X0 1667 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 RIC1Q4ADV7 1423 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 CEP152O94986 1710 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 COL5A3P25940 1745 aaPredicted RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 COL11A1P12107 1806 aaPredicted RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 BORCS7-ASMTA0A0B4J1R7 106 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 A0A1B0GVG6 124 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 ARRDC5A6NEK1 342 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 HMSDA8MTL9 139 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 C1orf196B1AJZ1 125 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 C3orf84H3BNL1 204 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 TAX1BP3O14907 124 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 GGCTO75223 188 aaKnown RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 BANF1O75531 89 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 CLPSP04118 112 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 HTR1AP08908 422 aa1.32□□□□□ -2.2
CCDC38-208ENST00000549876 OGNP20774 298 aaKnown RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 PEBP1P30086 187 aaKnown RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 SRP9P49458 86 aaKnown RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 EIF5AP63241 154 aaKnown RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 SURF2Q15527 256 aaPredicted RBP1.32□□□□□ -2.2
CCDC38-208ENST00000549876 DPPA3Q6W0C5 159 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms