RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 OR10J1P30954 320 aa16.24■□□□□ 0.19
VPS29-206ENST00000549578 SYNJ2BPP57105 145 aa16.24■□□□□ 0.19
VPS29-206ENST00000549578 IGKV1-17P01599 117 aa16.23■□□□□ 0.19
VPS29-206ENST00000549578 RPL12P30050 165 aaKnown RBP16.23■□□□□ 0.19
VPS29-206ENST00000549578 AKR1C1Q04828 323 aa16.23■□□□□ 0.19
VPS29-206ENST00000549578 KLF5Q13887 457 aaPredicted RBP16.23■□□□□ 0.19
VPS29-206ENST00000549578 TIGITQ495A1 244 aa16.23■□□□□ 0.19
VPS29-206ENST00000549578 ZNF414Q96IQ9 312 aa16.23■□□□□ 0.19
VPS29-206ENST00000549578 ST6GAL2Q96JF0 529 aa16.23■□□□□ 0.19
VPS29-206ENST00000549578 FXYD6-FXYD2A0A087WZ82 144 aa16.22■□□□□ 0.19
VPS29-206ENST00000549578 HBG1P69891 147 aa16.22■□□□□ 0.19
VPS29-206ENST00000549578 HBG2P69892 147 aa16.22■□□□□ 0.19
VPS29-206ENST00000549578 LILRB2Q8N423 598 aa16.22■□□□□ 0.19
VPS29-206ENST00000549578 IGKV1D-37A0A075B6S9 117 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 IGKV1OR2-108A0A075B7D4 117 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 TRAV30A0A087WSZ9 112 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 ZFP92A6NM28 416 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 SCAF4O95104 1147 aaKnown RBP16.21■□□□□ 0.19
VPS29-206ENST00000549578 S100A11P31949 105 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 BAXQ07812 192 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 GPHB5Q86YW7 130 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 OR1S2Q8NGQ3 325 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 GGACTQ9BVM4 153 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 PKD1L1Q8TDX9 2849 aa16.21■□□□□ 0.19
VPS29-206ENST00000549578 RELQ04864 619 aaPredicted RBP16.2■□□□□ 0.18
VPS29-206ENST00000549578 PRR31Q5SQ13 230 aa16.2■□□□□ 0.18
VPS29-206ENST00000549578 UNQ9165/PRO28630Q6UXU0 137 aa16.2■□□□□ 0.18
VPS29-206ENST00000549578 C1QL4Q86Z23 238 aa16.2■□□□□ 0.18
VPS29-206ENST00000549578 OR5C1Q8NGR4 320 aa16.2■□□□□ 0.18
VPS29-206ENST00000549578 HSPB11Q9Y547 144 aa16.2■□□□□ 0.18
VPS29-206ENST00000549578 IGHV3OR16-8A0A075B7F1 116 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 ZNF320A2RRD8 509 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 FNDC10F2Z333 226 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 OVOL1O14753 267 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 SCGB2A1O75556 95 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 CD33P20138 364 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 FAM106AQ4KMX7 169 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 TMEM144Q7Z5S9 345 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 ZNF546Q86UE3 836 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 AKAP14Q86UN6 197 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 THAP8Q8NA92 274 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 NDUFA4O00483 81 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 YIF1AO95070 293 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 ZNF90Q03938 601 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 CLINT1Q14677 625 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 TREML4Q6UXN2 200 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 ZNF600Q6ZNG1 722 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 RCC1LQ96I51 464 aaKnown RBP16.19■□□□□ 0.18
VPS29-206ENST00000549578 TMEM147Q9BVK8 224 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 NPVFQ9HCQ7 196 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 UQCC1Q9NVA1 299 aa16.19■□□□□ 0.18
VPS29-206ENST00000549578 UBE2L5PA0A1B0GUS4 154 aa16.18■□□□□ 0.18
VPS29-206ENST00000549578 WFDC9Q8NEX5 89 aa16.18■□□□□ 0.18
VPS29-206ENST00000549578 TMEM190Q8WZ59 177 aa16.18■□□□□ 0.18
VPS29-206ENST00000549578 AQP10Q96PS8 301 aa16.18■□□□□ 0.18
VPS29-206ENST00000549578 SMIM3Q9BZL3 60 aa16.18■□□□□ 0.18
VPS29-206ENST00000549578 TNFSF18Q9UNG2 199 aa16.18■□□□□ 0.18
VPS29-206ENST00000549578 PUS1Q9Y606 427 aaKnown RBP eCLIP16.18■□□□□ 0.18
VPS29-206ENST00000549578 NUP62P37198 522 aaPredicted RBP16.17■□□□□ 0.18
VPS29-206ENST00000549578 YPEL3P61236 119 aaPredicted RBP16.17■□□□□ 0.18
VPS29-206ENST00000549578 ATP6V1FQ16864 119 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 VWC2Q2TAL6 325 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 TOMM20LQ6UXN7 152 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 REC114Q7Z4M0 266 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 OR11H4Q8NGC9 324 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 OR9G4Q8NGQ1 327 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 TRGV9Q99603 122 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 C20orf24Q9BUV8 137 aa16.17■□□□□ 0.18
VPS29-206ENST00000549578 LGALS9O00182 355 aa16.16■□□□□ 0.18
VPS29-206ENST00000549578 ARPC5O15511 151 aa16.16■□□□□ 0.18
VPS29-206ENST00000549578 CD300CQ08708 224 aa16.16■□□□□ 0.18
VPS29-206ENST00000549578 TCTE3Q8IZS6 198 aa16.16■□□□□ 0.18
VPS29-206ENST00000549578 INO80EQ8NBZ0 244 aaPredicted RBP16.16■□□□□ 0.18
VPS29-206ENST00000549578 CMYA5Q8N3K9 4069 aa16.16■□□□□ 0.18
VPS29-206ENST00000549578 RNF222A6NCQ9 220 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 TOMM40O96008 361 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 RD3LP0DJH9 198 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 PSG1P11464 419 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 EDN2P20800 178 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 OR2F1Q13607 317 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 TEPPQ6URK8 271 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 ZFAND3Q9H8U3 227 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 LSM4Q9Y4Z0 139 aaKnown RBP16.15■□□□□ 0.18
VPS29-206ENST00000549578 NOTCH3Q9UM47 2321 aa16.15■□□□□ 0.18
VPS29-206ENST00000549578 ZNF207O43670 478 aaKnown RBP16.14■□□□□ 0.18
VPS29-206ENST00000549578 AP2S1P53680 142 aaPredicted RBP16.14■□□□□ 0.18
VPS29-206ENST00000549578 TM4SF20Q53R12 229 aa16.14■□□□□ 0.18
VPS29-206ENST00000549578 Q8WTZ3 238 aa16.14■□□□□ 0.18
VPS29-206ENST00000549578 WDR83OSQ9Y284 106 aa16.14■□□□□ 0.18
VPS29-206ENST00000549578 TMEM213A2RRL7 107 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 A8MWP6 167 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 IGLL1P15814 213 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 GATA2P23769 480 aaPredicted RBP16.14■□□□□ 0.17
VPS29-206ENST00000549578 IL34Q6ZMJ4 242 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 TMEM182Q6ZP80 229 aaPredicted RBP16.14■□□□□ 0.17
VPS29-206ENST00000549578 MGST2Q99735 147 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 ATP5SQ99766 215 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 PEMTQ9UBM1 199 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 FBXL17Q9UF56 701 aa16.14■□□□□ 0.17
VPS29-206ENST00000549578 SEC14L6B5MCN3 397 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms