RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 UGT2B7P16662 529 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 PVALBP20472 110 aaPredicted RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 CFL1P23528 166 aaKnown RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 CRYBB3P26998 211 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 CD40LGP29965 261 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 OMPP47874 163 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 PSMB3P49720 205 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 NKX2-5P52952 324 aaPredicted RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 AP2S1P53680 142 aaPredicted RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 AP3S2P59780 193 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 DAD1P61803 113 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 HIST1H3AP68431 136 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 BASP1P80723 227 aaKnown RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 H3F3AP84243 136 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 OR2F1Q13607 317 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 POU6F1Q14863 301 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 SPA17Q15506 151 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 ZNF791Q3KP31 576 aaPredicted RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 DNAL1Q4LDG9 190 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 TRMT12Q53H54 448 aaKnown RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 CD200R1LQ6Q8B3 271 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 SCGB1D4Q6XE38 83 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 HIST2H3AQ71DI3 136 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 OR6V1Q8N148 313 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 OR5B17Q8NGF7 314 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 OR8J2Q8NGG1 315 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 LHFPL5Q8TAF8 219 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 DNAJB3Q8WWF6 145 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 PTH2Q96A98 100 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 IMP4Q96G21 291 aaKnown RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 Q96M85 177 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 PRAP1Q96NZ9 151 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 RBP7Q96R05 134 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 EIF5A2Q9GZV4 153 aaKnown RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 VCX3BQ9H321 246 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 CENPHQ9H3R5 247 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 SLC2A9Q9NRM0 540 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 SPANXA1Q9NS26 97 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 SPANXCQ9NY87 97 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 EMC3Q9P0I2 261 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 RSL24D1Q9UHA3 163 aaKnown RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 ENPP5Q9UJA9 477 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 SOX21Q9Y651 276 aaPredicted RBP0.35□□□□□ -2.35
CEP290-204ENST00000547926 DNAH17Q9UFH2 4485 aa0.35□□□□□ -2.35
CEP290-204ENST00000547926 TONSLQ96HA7 1378 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 NCOA6Q14686 2063 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 HEATR5BQ9P2D3 2071 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 IGKV2-40A0A087WW87 121 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 TRAV41A0A0B4J266 112 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 A0A1B0GW15 77 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 LINC00862A6NCI5 91 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 E5RI56 91 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 FTCDNL1E5RQL4 147 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 CXCR6O00574 342 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 COPEO14579 308 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 AZIN1O14977 448 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 PFDN6O15212 129 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 PGLYRP1O75594 196 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 PIAS1O75925 651 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 PSMG1O95456 288 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 MT-CO2P00403 227 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 IGKV2D-40P01614 121 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 C1QCP02747 245 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 CRYBA1P05813 215 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 IL3P08700 152 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 CTXN2P0C2S0 81 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 LINC00614P0C842 121 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 LIMS3P0CW19 117 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 LIMS4P0CW20 117 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 PET100P0DJ07 73 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 GADD45AP24522 165 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 MIPP30301 263 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 RCVRNP35243 200 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 OPRM1P35372 400 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 CDKN2CP42773 168 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 HAAOP46952 286 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 OR10A3P58181 314 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 RAB5BP61020 215 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 PSME3P61289 254 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 FGF12P61328 243 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 POLR2GP62487 172 aaKnown RBP eCLIP0.34□□□□□ -2.35
CEP290-204ENST00000547926 BTN3A2P78410 334 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 CAV1Q03135 178 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 RELAQ04206 551 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 EDDM3AQ14507 147 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 TBC1D28Q2M2D7 210 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 IAH1Q2TAA2 248 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 PLPPR5Q32ZL2 321 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 OR10J3Q5JRS4 329 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 CDKL4Q5MAI5 379 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 TTC33Q6PID6 262 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 GID4Q8IVV7 300 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 KRT222Q8N1A0 295 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 LRRC25Q8N386 305 aaPredicted RBP0.34□□□□□ -2.35
CEP290-204ENST00000547926 TMEM156Q8N614 296 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 C3orf56Q8N813 242 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 ZNF565Q8N9K5 539 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 GPR32P1Q8NGA4 272 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 OR2D3Q8NGH3 330 aa0.34□□□□□ -2.35
CEP290-204ENST00000547926 FNDC9Q8TBE3 224 aa0.34□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms