RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 OR5V1Q9UGF6 321 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 SNX12Q9UMY4 172 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 LINC00588Q9Y4M8 146 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 APC2O95996 2303 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 DOCK9Q9BZ29 2069 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 F8P00451 2351 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 AKAP9Q99996 3911 aa2.6□□□□□ -1.99
SCAF11-210ENST00000547654 USP9YO00507 2555 aaPredicted RBP2.59□□□□□ -1.99
SCAF11-210ENST00000547654 BSNQ9UPA5 3926 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 KIAA1671Q9BY89 1806 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 TRBV20OR9-2A0A075B6H5 130 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 IGLV4-60A0A075B6I1 120 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 IGKV2D-24A0A075B6R9 120 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 hCG_1818297A0A087WSY0 165 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 TRAV40A0A0B4J280 105 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 EXOC1LA0A1B0GW35 172 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 A8MT66 165 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 C9JCJ5 164 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 PPP5D1E7EU14 171 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 IGHV3-53P01767 116 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 PRB1P04280 392 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 IGHV3-30-3P0DP02 117 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 IDO1P14902 403 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 ERP29P30040 261 aaKnown RBP2.59□□□□□ -1.99
SCAF11-210ENST00000547654 SERPINB1P30740 379 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 TSPEAR-AS2P59090 65 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 RPS20P60866 119 aaKnown RBP2.59□□□□□ -1.99
SCAF11-210ENST00000547654 TFAMQ00059 246 aaKnown RBP2.59□□□□□ -1.99
SCAF11-210ENST00000547654 BIKQ13323 160 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 MOGQ16653 247 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 AKR1C8PQ5T2L2 129 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 Q6P435 159 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 GOLT1AQ6ZVE7 132 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 GPHB5Q86YW7 130 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 RPRMLQ8N4K4 120 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 SMIM20Q8N5G0 67 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 SGMS2Q8NHU3 365 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 LMX1AQ8TE12 382 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 SPIN2AQ99865 258 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 SPIN2BQ9BPZ2 258 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 C8orf4Q9NR00 106 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 C19orf12Q9NSK7 152 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 LOXHD1Q8IVV2 1947 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 MYH13Q9UKX3 1938 aa2.59□□□□□ -1.99
SCAF11-210ENST00000547654 CRYBG3Q68DQ2 2970 aa2.59□□□□□ -2
SCAF11-210ENST00000547654 MICAL3Q7RTP6 2002 aa2.59□□□□□ -2
SCAF11-210ENST00000547654 IGKV1OR2-108A0A075B7D4 117 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 IGHV3OR16-8A0A075B7F1 116 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 A0A1W2PQ67 120 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 DHRS12A0PJE2 317 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 A8MUN3 132 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 A8MUU9 505 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 A8MWP6 167 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.58□□□□□ -2
SCAF11-210ENST00000547654 H3BQ85 93 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 LST1O00453 97 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 SLC17A3O00476 420 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 LECT2O14960 151 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 HMGB3O15347 200 aaKnown RBP2.58□□□□□ -2
SCAF11-210ENST00000547654 C8GP07360 202 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 INAFM2P0DMQ5 153 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 SLC25A16P16260 332 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 NPPCP23582 126 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 RAB13P51153 203 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 KLF3P57682 345 aaPredicted RBP2.58□□□□□ -2
SCAF11-210ENST00000547654 ARPC4P59998 168 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 RPL30P62888 115 aaKnown RBP2.58□□□□□ -2
SCAF11-210ENST00000547654 FKBP1AP62942 108 aaKnown RBP2.58□□□□□ -2
SCAF11-210ENST00000547654 TNFRSF9Q07011 255 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 CST6Q15828 149 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 TMEM69Q5SWH9 247 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 RASL11AQ6T310 242 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 ZNF664Q8N3J9 261 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 PACRGLQ8N7B6 248 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 OR13C8Q8NGS7 320 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 OR10A6Q8NH74 314 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 CD200R1Q8TD46 325 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 STARD4Q96DR4 205 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 TSPAN32Q96QS1 320 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 DDA1Q9BW61 102 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 MND1Q9BWT6 205 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 SCRT1Q9BWW7 348 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 WDR61Q9GZS3 305 aaKnown RBP2.58□□□□□ -2
SCAF11-210ENST00000547654 TMEM222Q9H0R3 208 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 SMPXQ9UHP9 88 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 TMEM56-RWDD3S4R434 201 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 CENPEQ02224 2701 aa2.58□□□□□ -2
SCAF11-210ENST00000547654 MTORP42345 2549 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 IGSF23A1L1A6 192 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 GRIFINA4D1Z8 144 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 LOC730098B7Z3J9 87 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 G3V2T6 193 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 PLA2G10O15496 165 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 S1PR2O95136 353 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 NDUFC2O95298 119 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 PRB2P02812 416 aaPredicted RBP2.57□□□□□ -2
SCAF11-210ENST00000547654 CRHP06850 196 aa2.57□□□□□ -2
SCAF11-210ENST00000547654 SRP19P09132 144 aaKnown RBP2.57□□□□□ -2
SCAF11-210ENST00000547654 RBP1P09455 135 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms