RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CEACAM3P40198 252 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 RAB31Q13636 194 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 BSXQ3C1V8 233 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 KHDC3LQ587J8 217 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 Q6ZS46 218 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 TEX45Q8NA69 505 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 C10orf105Q8TEF2 133 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 UNKLQ9H9P5 680 aaKnown RBP9.47□□□□□ -0.89
CCDC38-202ENST00000546386 TIMM9Q9Y5J7 89 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 A0A1W2PN81 502 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 OR2J3O76001 311 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 CHRNA7P36544 502 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 PRR20EP86478 221 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 PRR20CP86479 221 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 PRR20DP86480 221 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 PRR20BP86481 221 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 PRR20AP86496 221 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 LYZP61626 148 aa9.46□□□□□ -0.89
CCDC38-202ENST00000546386 C5orf64Q2M2E5 130 aa9.46□□□□□ -0.89
CCDC38-202ENST00000546386 TIGITQ495A1 244 aa9.46□□□□□ -0.89
CCDC38-202ENST00000546386 COMMD1Q8N668 190 aa9.46□□□□□ -0.89
CCDC38-202ENST00000546386 ELOVL1Q9BW60 279 aa9.46□□□□□ -0.89
CCDC38-202ENST00000546386 JMJD1CQ15652 2540 aa9.46□□□□□ -0.9
CCDC38-202ENST00000546386 TRBV20OR9-2A0A075B6H5 130 aa9.46□□□□□ -0.9
CCDC38-202ENST00000546386 COLCA2A8K830 154 aa9.46□□□□□ -0.9
CCDC38-202ENST00000546386 OR2C1O95371 312 aa9.46□□□□□ -0.9
CCDC38-202ENST00000546386 MBP02144 154 aa9.46□□□□□ -0.9
CCDC38-202ENST00000546386 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
CCDC38-202ENST00000546386 LINC00305Q7Z4B0 112 aa9.46□□□□□ -0.9
CCDC38-202ENST00000546386 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 TRAV1-1A0A0B4J248 108 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 TRAV34A0A0B4J273 112 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 BTBD17A6NE02 478 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 OR2T8A6NH00 312 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 NPFFO15130 113 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 GCHFRP30047 84 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 RANP62826 216 aaKnown RBP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 DPPA3Q6W0C5 159 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 RBMS3Q6XE24 437 aaKnown RBP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 CYP2G1PQ6ZSU1 146 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 OR2T10Q8NGZ9 312 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 COX7A2P2O60397 106 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 TGFAP01135 160 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 CXCL1P09341 107 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 STAG3L2P0CL84 134 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 CRYBB3P26998 211 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 SUB1P53999 127 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 OR5I1Q13606 314 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 RNF212Q495C1 297 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 FAM71F2Q6NXP2 309 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 IL17RELQ6ZVW7 336 aa9.45□□□□□ -0.9
CCDC38-202ENST00000546386 Q71RC1 249 aaPredicted RBP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 NOL4LQ96MY1 436 aaPredicted RBP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 PARD6GQ9BYG4 376 aaPredicted RBP9.45□□□□□ -0.9
CCDC38-202ENST00000546386 LOC105371267A0A1B0GV96 52 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 PSG1P11464 419 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 RHOBP62745 196 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 GNG5P63218 68 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 TVP23CQ96ET8 276 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 RBM14Q96PK6 669 aaKnown RBP9.44□□□□□ -0.9
CCDC38-202ENST00000546386 SAV1Q9H4B6 383 aaPredicted RBP9.44□□□□□ -0.9
CCDC38-202ENST00000546386 MLXQ9UH92 298 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 F11RQ9Y624 299 aaKnown RBP9.44□□□□□ -0.9
CCDC38-202ENST00000546386 MPDU1O75352 247 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 UBE2E1P51965 193 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 HABP2Q14520 560 aaPredicted RBP9.44□□□□□ -0.9
CCDC38-202ENST00000546386 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 GGACTQ9BVM4 153 aa9.44□□□□□ -0.9
CCDC38-202ENST00000546386 IGHV7-81A0A0B4J1V7 117 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 ATP6V0E1O15342 81 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 SPINK4O60575 86 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 BLCAPP62952 87 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 TMEM95Q3KNT9 176 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 Q8WTZ3 238 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 HIST1H2BAQ96A08 127 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 C17orf77Q96MU5 243 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 DNAJC4Q9NNZ3 241 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 CXorf1O96002 111 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 IFNA1P01562 189 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 FAM3BP58499 235 aaPredicted RBP9.43□□□□□ -0.9
CCDC38-202ENST00000546386 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
CCDC38-202ENST00000546386 C10orf113Q5VZT2 155 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 IGFL4Q6B9Z1 124 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 Q8N9W7 124 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 SLC25A2Q9BXI2 301 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 SMCO4Q9NRQ5 59 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 FUT9Q9Y231 359 aa9.43□□□□□ -0.9
CCDC38-202ENST00000546386 SEC14L6B5MCN3 397 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 K7EIM0 57 aa9.42□□□□□ -0.9
CCDC38-202ENST00000546386 SMAD7O15105 426 aaKnown RBP9.42□□□□□ -0.9
CCDC38-202ENST00000546386 ZNF207O43670 478 aaKnown RBP9.42□□□□□ -0.9
CCDC38-202ENST00000546386 NDUFB8O95169 186 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms