RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 OR1S2Q8NGQ3 325 aa11.88□□□□□ -0.51
CPSF7-225ENST00000545934 PDCD10Q9BUL8 212 aa11.88□□□□□ -0.51
CPSF7-225ENST00000545934 IGLV2-18A0A075B6J9 118 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 SMIM9A6NGZ8 99 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 ATG12O94817 140 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 IFNA10P01566 189 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 SPART-AS1P0CW21 52 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 HLA-DRB4P13762 266 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 PI3P19957 117 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 PIGPP57054 158 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-225ENST00000545934 USF2Q15853 346 aaPredicted RBP11.87□□□□□ -0.51
CPSF7-225ENST00000545934 RNF212Q495C1 297 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 PRSS54Q6PEW0 395 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 Q8WTZ3 238 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 NRN1Q9NPD7 142 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 HLA-DRB4X5D2U9 266 aa11.87□□□□□ -0.51
CPSF7-225ENST00000545934 C3orf85A0A1B0GTC6 90 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 TMEM189A5PLL7 270 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 M0QYG6 137 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 BUB3O43684 328 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 IFNA21P01568 189 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 APOA1P02647 267 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 UCP1P25874 307 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 SNRPD3P62318 126 aaKnown RBP11.86□□□□□ -0.51
CPSF7-225ENST00000545934 DHODHQ02127 395 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 Q9H521 79 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 DKK2Q9UBU2 259 aa11.86□□□□□ -0.51
CPSF7-225ENST00000545934 APOBP04114 4563 aaKnown RBP11.86□□□□□ -0.51
CPSF7-225ENST00000545934 RPS10-NUDT3A0A1W2PQS6 291 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 HTR2BP41595 481 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 NKX2-1P43699 371 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-225ENST00000545934 SPCS3P61009 180 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 GDF5OSQ5U4N7 250 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 SNX29P2Q8IUI4 249 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 OR52E5Q8NH55 327 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 TMEM170AQ8WVE7 144 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 YIPF6Q96EC8 236 aa11.85□□□□□ -0.51
CPSF7-225ENST00000545934 SLC25A4P12235 298 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 PGAM2P15259 253 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 OR10J1P30954 320 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 RND2P52198 227 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 OXA1LQ15070 435 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 SP6Q3SY56 376 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 C2orf83Q53S99 150 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 SIGLEC15Q6ZMC9 328 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 UBE2DNLQ8IWF7 75 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 RNASEH2CQ8TDP1 164 aaKnown RBP11.84□□□□□ -0.51
CPSF7-225ENST00000545934 CLUHP3Q96NS8 147 aa11.84□□□□□ -0.51
CPSF7-225ENST00000545934 SMIM31A0A1B0GVY4 71 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 NXPH3O95157 252 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 IL4P05112 153 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 LSM3P62310 102 aaKnown RBP11.83□□□□□ -0.52
CPSF7-225ENST00000545934 TRIM16LQ309B1 348 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 SOHLH1Q5JUK2 328 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 ARRDC1Q8N5I2 433 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
CPSF7-225ENST00000545934 NIPSNAP3BQ9BS92 247 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 COMMD3Q9UBI1 195 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
CPSF7-225ENST00000545934 TEX48A0A1B0GUV7 120 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 TOMM40O96008 361 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 ELK1P19419 428 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 EMP1P54849 157 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 DEFB1P60022 68 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 FAM222AQ5U5X8 452 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 FAM219AQ8IW50 185 aa11.82□□□□□ -0.52
CPSF7-225ENST00000545934 SAV1Q9H4B6 383 aaPredicted RBP11.82□□□□□ -0.52
CPSF7-225ENST00000545934 GSTZ1O43708 216 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-225ENST00000545934 B3GALNT1O75752 331 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 ATP6V1G2O95670 118 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 CDS2O95674 445 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 CD3DP04234 171 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 RNASE10Q5GAN6 216 aaKnown RBP11.81□□□□□ -0.52
CPSF7-225ENST00000545934 C1orf134Q5TEV5 83 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 LHFPL5Q8TAF8 219 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
CPSF7-225ENST00000545934 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 COPZ2Q9P299 210 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 KLK11Q9UBX7 282 aa11.81□□□□□ -0.52
CPSF7-225ENST00000545934 SOCS3O14543 225 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 CDK2AP2O75956 126 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 FXYD7P58549 80 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 FOXI2Q6ZQN5 318 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 CCDC71LQ8N9Z2 235 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 OR13C8Q8NGS7 320 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 NPIPB3Q92617 1050 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 WDR12Q9GZL7 423 aaKnown RBP11.8□□□□□ -0.52
CPSF7-225ENST00000545934 TMEM222Q9H0R3 208 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 HEYLQ9NQ87 328 aaPredicted RBP11.8□□□□□ -0.52
CPSF7-225ENST00000545934 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
CPSF7-225ENST00000545934 HPGDSO60760 199 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 PSG1P11464 419 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 TBPP20226 339 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 ZNF79Q15937 498 aa11.79□□□□□ -0.52
CPSF7-225ENST00000545934 ETFRF1Q6IPR1 90 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms