RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 NFYBP25208 207 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 HLA-DMBP28068 263 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 IFNA8P32881 189 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 SSTR5P35346 364 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 REG1BP48304 166 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 ACTBP60709 375 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 RPS11P62280 158 aaKnown RBP eCLIP1.67□□□□□ -2.14
SNHG1-224ENST00000545688 TMEM267Q0VDI3 215 aaPredicted RBP1.67□□□□□ -2.14
SNHG1-224ENST00000545688 TSPAN31Q12999 210 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 MMDQ15546 238 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 WHAMMP3Q1A5X7 153 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 ACTBL2Q562R1 376 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 CT45A1Q5HYN5 189 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 SOHLH1Q5JUK2 328 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 FAHD1Q6P587 224 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 ERICH5Q6P6B1 374 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 FAM131AQ6UXB0 335 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 SLC25A26Q70HW3 274 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 TRAPPC6BQ86SZ2 158 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 Q8IYB0 196 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF565Q8N9K5 539 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 CHST4Q8NCG5 386 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 LFNGQ8NES3 379 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 PROKR2Q8NFJ6 384 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 OR8D4Q8NGM9 314 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 CT45A3Q8NHU0 189 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 OR51E1Q8TCB6 317 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 USMG5Q96IX5 58 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF251Q9BRH9 671 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 SHANK2-AS3Q9BTD1 123 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 ROPN1BQ9BZX4 212 aaPredicted RBP1.67□□□□□ -2.14
SNHG1-224ENST00000545688 PBOV1Q9GZY1 135 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 RHOFQ9HBH0 211 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 PARP11Q9NR21 331 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 DNAJC27Q9NZQ0 273 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 PEF1Q9UBV8 284 aaKnown RBP1.67□□□□□ -2.14
SNHG1-224ENST00000545688 PIGLQ9Y2B2 252 aa1.67□□□□□ -2.14
SNHG1-224ENST00000545688 TMEM269A0A1B0GVZ9 245 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 A8MWP6 167 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 SIRPB1O00241 398 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 SOCS1O15524 211 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 ORC5O43913 435 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CYB5AP00167 134 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 NPPAP01160 153 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 IFNA14P01570 189 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 TRGV3P03979 118 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CRYGBP07316 175 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 GZMHP20718 246 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CBLN1P23435 193 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 HSD11B1P28845 292 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CASQ1P31415 396 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 KCNJ3P48549 501 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 GNG10P50151 68 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CRISP1P54107 249 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 TPPP2P59282 170 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 NUTF2P61970 127 aaKnown RBP1.66□□□□□ -2.14
SNHG1-224ENST00000545688 RBX1P62877 108 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 C12orf74Q32Q52 190 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 COQ5Q5HYK3 327 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 ELP2Q6IA86 826 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 PLET1Q6UQ28 207 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 UNQ5815/PRO19632Q6UWF5 114 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 ASCL4Q6XD76 172 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF833PQ6ZTB9 187 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 SLC16A13Q7RTY0 426 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 SPATA12Q7Z6I5 190 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 GPHB5Q86YW7 130 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 IFT20Q8IY31 132 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 GAPTQ8N292 157 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 OR10X1Q8NGY0 326 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 OR6N2Q8NGY6 317 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 OR11H2Q8NH07 326 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 KCNG3Q8TAE7 436 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 FAM81AQ8TBF8 368 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 PLPPR1Q8TBJ4 325 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 LZICQ8WZA0 190 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 C10orf35Q96D05 121 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 GALNT14Q96FL9 552 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 TPD52L3Q96J77 140 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 RDH12Q96NR8 316 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 FAM103A1Q9BTL3 118 aaKnown RBP1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CHST5Q9GZS9 411 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 NSRP1Q9H0G5 558 aaKnown RBP1.66□□□□□ -2.14
SNHG1-224ENST00000545688 FBXL15Q9H469 300 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 EXOSC4Q9NPD3 245 aaKnown RBP1.66□□□□□ -2.14
SNHG1-224ENST00000545688 CMC2Q9NRP2 79 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 ERGIC3Q9Y282 383 aa1.66□□□□□ -2.14
SNHG1-224ENST00000545688 LPAP08519 4548 aa1.65□□□□□ -2.14
SNHG1-224ENST00000545688 MEIKINA0A087WXM9 373 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 NBDYA0A0U1RRE5 68 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 A6NIN4 97 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 DEFB4AO15263 64 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 EIF3GO75821 320 aaKnown RBP eCLIP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 FADS2O95864 444 aaKnown RBP1.65□□□□□ -2.15
SNHG1-224ENST00000545688 HLA-DQB1P01920 261 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 SCTP09683 121 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 CT45A6P0DMU7 189 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 CT45A5P0DMU8 189 aa1.65□□□□□ -2.15
SNHG1-224ENST00000545688 CT45A7P0DMV0 189 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms