RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, human

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-223	ENST00000545215	LCE1D	Q5T752	114 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	LAMTOR1	Q6IAA8	161 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	C10orf99	Q6UWK7	81 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	C16orf82	Q7Z2V1	217 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	NRARP	Q7Z6K4	114 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	MRPL52	Q86TS9	123 aa	Known RBP	5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	PDPN	Q86YL7	162 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	ODF3L1	Q8IXM7	274 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	DRAM1	Q8N682	238 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	NHLRC2	Q8NBF2	726 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	NEXN-AS1	Q8NBZ9	246 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	ABHD14B	Q96IU4	210 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	PARP12	Q9H0J9	701 aa	Known RBP	5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	GPR132	Q9UNW8	380 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	WASHC3	Q9Y3C0	194 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	GOLT1B	Q9Y3E0	138 aa		5.1	□□□□□ -1.59
LDHA-223	ENST00000545215	IGKV1D-13	A0A0B4J2D9	117 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215		A0A1W2PPE3	182 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215		A0A1W2PPI3	338 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	TEX46	H3BTG2	121 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	PLA2G10	O15496	165 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	RBMXL2	O75526	392 aa	Known RBP	5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	PGLYRP1	O75594	196 aa	Predicted RBP	5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	IGHV3-7	P01780	117 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	SNRNP70	P08621	437 aa	Known RBP	5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	IGKV1-13	P0DP09	117 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	ANXA3	P12429	323 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	GP9	P14770	177 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	RPA2	P15927	270 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	DUT	P33316	252 aa	Known RBP	5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	CDKN1B	P46527	198 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	LGALS7	P47929	136 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	RPL23A	P62750	156 aa	Known RBP	5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	EBI3	Q14213	229 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	TATDN3	Q17R31	274 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	TMEM128	Q5BJH2	165 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	UQCC3	Q6UW78	93 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	ZNF818P	Q6ZRF7	136 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	C18orf65	Q6ZTR6	163 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	MOB3B	Q86TA1	216 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	SVBP	Q8N300	66 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	DUSP18	Q8NEJ0	188 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	OR13C8	Q8NGS7	320 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	OR2T10	Q8NGZ9	312 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	OR4S2	Q8NH73	311 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	MARCH1	Q8TCQ1	289 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	FXYD6	Q9H0Q3	95 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	CCL28	Q9NRJ3	127 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	SLC2A9	Q9NRM0	540 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	RNF150	Q9ULK6	438 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	TBC1D24	Q9ULP9	559 aa		5.09	□□□□□ -1.59
LDHA-223	ENST00000545215	VPS13B	Q7Z7G8	4022 aa		5.09	□□□□□ -1.6
LDHA-223	ENST00000545215	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	C5orf52	A6NGY3	159 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215		H0YJW9	148 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	CREBL2	O60519	120 aa	Predicted RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	PRAF2	O60831	178 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	MOS	P00540	346 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	HRAS	P01112	189 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	APOC3	P02656	99 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	TCRB	P04435	133 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	SERPINE2	P07093	398 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	STAG3L3	P0CL85	134 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	CT45A6	P0DMU7	189 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	CT45A5	P0DMU8	189 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	CT45A7	P0DMV0	189 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	CD24	P25063	80 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	F2R	P25116	425 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	DDT	P30046	118 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	FHIT	P49789	147 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	PIGP	P57054	158 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	DHODH	Q02127	395 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	USF2	Q15853	346 aa	Predicted RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	RPL39P5	Q59GN2	51 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	UTF1	Q5T230	341 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	FAAP20	Q6NZ36	180 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215		Q75L30	129 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	C5orf24	Q7Z6I8	188 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	SGPP2	Q8IWX5	399 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	PRSS3P2	Q8NHM4	247 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	VSTM2A	Q8TAG5	236 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	THAP6	Q8TBB0	222 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	FLYWCH2	Q96CP2	140 aa	Known RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	GALNT14	Q96FL9	552 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	DUX3	Q96PT4	197 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	TSNAX	Q99598	290 aa	Known RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	MRPL20	Q9BYC9	149 aa	Known RBP	5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	SLC35D1	Q9NTN3	355 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	ZFP57	Q9NU63	452 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	COMMD9	Q9P000	198 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	CACFD1	Q9UGQ2	172 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	COX11	Q9Y6N1	276 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	DSCAML1	Q8TD84	2053 aa		5.08	□□□□□ -1.6
LDHA-223	ENST00000545215	C3orf85	A0A1B0GTC6	90 aa		5.07	□□□□□ -1.6
LDHA-223	ENST00000545215	DUXB	A0A1W2PPF3	345 aa		5.07	□□□□□ -1.6
LDHA-223	ENST00000545215	CRYM-AS1	A6NIL9	109 aa		5.07	□□□□□ -1.6
LDHA-223	ENST00000545215		H0Y980	276 aa		5.07	□□□□□ -1.6
LDHA-223	ENST00000545215	CCL24	O00175	119 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms