RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 FAM103A1Q9BTL3 118 aaKnown RBP13.2□□□□□ -0.3
CHFR-224ENST00000545046 SAV1Q9H4B6 383 aaPredicted RBP13.2□□□□□ -0.3
CHFR-224ENST00000545046 C1RLQ9NZP8 487 aa13.2□□□□□ -0.3
CHFR-224ENST00000545046 H7BYZ3 331 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 ORM2P19652 201 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 SAA4P35542 130 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 LINC00305Q7Z4B0 112 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 C1QL4Q86Z23 238 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 OR1B1Q8NGR6 318 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 ARPC1AQ92747 370 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 PERPQ96FX8 193 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 USP24Q9UPU5 2620 aa13.19□□□□□ -0.3
CHFR-224ENST00000545046 A0A1W2PRE2 83 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
CHFR-224ENST00000545046 CX3CL1P78423 397 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 LINC01551Q86U37 167 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 SSX3Q99909 188 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 PAXXQ9BUH6 204 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 NPFFO15130 113 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 S100PP25815 95 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 OR51M1Q9H341 326 aa13.18□□□□□ -0.3
CHFR-224ENST00000545046 IGHV4-61A0A0C4DH41 118 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 VWC2LB2RUY7 222 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 HYPMO75409 117 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 S100A6P06703 90 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 PAX8Q06710 450 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 ZNF843Q8N446 348 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 AJUBAQ96IF1 538 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 DOPEY1Q5JWR5 2465 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 NPIPB5A8MRT5 1133 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 FAM210BQ96KR6 192 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 RASL11BQ9BPW5 248 aa13.17□□□□□ -0.3
CHFR-224ENST00000545046 GSX1Q9H4S2 264 aaPredicted RBP13.17□□□□□ -0.3
CHFR-224ENST00000545046 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
CHFR-224ENST00000545046 FABP1P07148 127 aa13.16□□□□□ -0.3
CHFR-224ENST00000545046 IGLC1P0CG04 106 aa13.16□□□□□ -0.3
CHFR-224ENST00000545046 GALR1P47211 349 aa13.16□□□□□ -0.3
CHFR-224ENST00000545046 PLP1P60201 277 aa13.16□□□□□ -0.3
CHFR-224ENST00000545046 SUMO1P63165 101 aaKnown RBP13.16□□□□□ -0.3
CHFR-224ENST00000545046 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
CHFR-224ENST00000545046 K7EIM0 57 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 CD99P14209 185 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 TTC9CQ8N5M4 171 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 AURKAIP1Q9NWT8 199 aaPredicted RBP13.15□□□□□ -0.3
CHFR-224ENST00000545046 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
CHFR-224ENST00000545046 TRBV24-1A0A075B6N3 115 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 MDFIC2A0A1B0GVS7 189 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 PPP1R2P9O14990 202 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 PYYP10082 97 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 CRYBB3P26998 211 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 Q8N9W7 124 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 NECAP1Q8NC96 275 aa13.15□□□□□ -0.3
CHFR-224ENST00000545046 FLNCQ14315 2725 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 HELTA6NFD8 242 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 PGPEP1LA6NFU8 196 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 C9JCJ5 164 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 TGOLN2O43493 480 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 PFN1P07737 140 aaKnown RBP13.14□□□□□ -0.31
CHFR-224ENST00000545046 PSG1P11464 419 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
CHFR-224ENST00000545046 TIGITQ495A1 244 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 OCC1Q8TAD7 63 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 IGHV4-30-2A0A087WSY4 118 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 COX6B1P14854 86 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 KLF17Q5JT82 389 aaPredicted RBP13.14□□□□□ -0.31
CHFR-224ENST00000545046 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 HIGD1AQ9Y241 93 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 LY96Q9Y6Y9 160 aa13.14□□□□□ -0.31
CHFR-224ENST00000545046 HLA-DRB1P01911 266 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 SRP14P37108 136 aaKnown RBP13.13□□□□□ -0.31
CHFR-224ENST00000545046 LYZP61626 148 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 NDPQ00604 133 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 FXYD5Q96DB9 178 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 THYN1Q9P016 225 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 ASH1LQ9NR48 2969 aaKnown RBP13.13□□□□□ -0.31
CHFR-224ENST00000545046 IGLV11-55A0A075B6I3 123 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 IGHV7-81A0A0B4J1V7 117 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 DSCR9P59020 149 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
CHFR-224ENST00000545046 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 SFRP2Q96HF1 295 aa13.13□□□□□ -0.31
CHFR-224ENST00000545046 TRAV30A0A087WSZ9 112 aa13.12□□□□□ -0.31
CHFR-224ENST00000545046 HNF1AP20823 631 aa13.12□□□□□ -0.31
CHFR-224ENST00000545046 MFAP4P55083 255 aa13.12□□□□□ -0.31
CHFR-224ENST00000545046 FANCD2OSQ96PS1 177 aa13.12□□□□□ -0.31
CHFR-224ENST00000545046 USP9XQ93008 2570 aaPredicted RBP13.12□□□□□ -0.31
CHFR-224ENST00000545046 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
CHFR-224ENST00000545046 IGKV1-17P01599 117 aa13.11□□□□□ -0.31
CHFR-224ENST00000545046 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
CHFR-224ENST00000545046 GNG4P50150 75 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms