RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 DUX3Q96PT4 197 aa7.48□□□□□ -1.21
NECAP1-207ENST00000544891 HAX1O00165 279 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-207ENST00000544891 OTX1P32242 354 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-207ENST00000544891 C3orf36Q3SXR2 165 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 CLEC19AQ6UXS0 136 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 M0R381 172 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 METRNQ9UJH8 293 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 SLC25A15Q9Y619 301 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 SMAD7O15105 426 aaKnown RBP7.47□□□□□ -1.21
NECAP1-207ENST00000544891 ZNHIT1O43257 154 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 IGKV3-15P01624 115 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 VDAC2P45880 294 aaPredicted RBP7.47□□□□□ -1.21
NECAP1-207ENST00000544891 COLCA1Q6ZS62 124 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 Q6ZS92 163 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 SMPXQ9UHP9 88 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 SCGB1A1P11684 91 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 MST1P26927 711 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 FAM201AQ5SY85 155 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 TMEM170BQ5T4T1 132 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 PSG8Q9UQ74 426 aa7.47□□□□□ -1.21
NECAP1-207ENST00000544891 TBL2Q9Y4P3 447 aaKnown RBP7.47□□□□□ -1.21
NECAP1-207ENST00000544891 C9JCJ5 164 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 H3BTX0 84 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 TCF21O43680 179 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 ATP5G3P48201 142 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 RHOGP84095 191 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 DTX1Q86Y01 620 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 LYPD1Q8N2G4 141 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 TRGV9Q99603 122 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 GNB1LQ9BYB4 327 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 TRBV24-1A0A075B6N3 115 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 CFPP27918 469 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 ZNF672Q499Z4 452 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-207ENST00000544891 DTX2Q86UW9 622 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 PARD6GQ9BYG4 376 aaPredicted RBP7.46□□□□□ -1.21
NECAP1-207ENST00000544891 ZNF319Q9P2F9 582 aa7.46□□□□□ -1.21
NECAP1-207ENST00000544891 SRCAPQ6ZRS2 3230 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM8BA6NDV4 472 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 CHCHD1Q96BP2 118 aaKnown RBP7.46□□□□□ -1.22
NECAP1-207ENST00000544891 MRAP2Q96G30 205 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 EFNA2O43921 213 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 IGHV3-48P01763 117 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 NUDT10Q8NFP7 164 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 ST20Q9HBF5 79 aa7.46□□□□□ -1.22
NECAP1-207ENST00000544891 GRIFINA4D1Z8 144 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 B4DSR2 109 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 ETV2O00321 342 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 EIF3GO75821 320 aaKnown RBP eCLIP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 EGR1P18146 543 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 SRSF1Q07955 248 aaKnown RBP eCLIP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 EFNB3Q15768 340 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM155Q4W5P6 130 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 OR10J3Q5JRS4 329 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 SLC25A48Q6ZT89 311 aaKnown RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 LINC01587Q99440 93 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 YAE1D1Q9NRH1 226 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM131Q92545 1883 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM178BH3BS89 294 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 FOXA3P55318 350 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 PAX8Q06710 450 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 ASCL4Q6XD76 172 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 C9orf139Q6ZV77 190 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 BMPERQ8N8U9 685 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 SLC25A2Q9BXI2 301 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 CYSLTR1Q9Y271 337 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 IGHV3-35A0A0C4DH35 117 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 PRR32B1ATL7 298 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TIMM23O14925 209 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 HBDP02042 147 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 ST6GALNAC3Q8NDV1 305 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM160Q9NX00 188 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 ARHGEF17Q96PE2 2063 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 IGKV1-12A0A0C4DH73 117 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 H0YIZ8 118 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 IGKV1D-12P01611 117 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 SRSF4Q08170 494 aaKnown RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 FOXF2Q12947 444 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 LDLRAD2Q5SZI1 272 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM14EPQ6UXP3 125 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 ITLN2Q8WWU7 325 aaPredicted RBP7.45□□□□□ -1.22
NECAP1-207ENST00000544891 KLK15Q9H2R5 256 aa7.45□□□□□ -1.22
NECAP1-207ENST00000544891 NUP210LQ5VU65 1888 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 PINLYPA6NC86 204 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 TMEM50AO95807 157 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 IGHV1-8P0DP01 117 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 SLC25A16P16260 332 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 PRO3102Q9H379 93 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 SCN2AQ99250 2005 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 TRAV41A0A0B4J266 112 aa7.44□□□□□ -1.22
NECAP1-207ENST00000544891 RBMY1BA6NDE4 496 aaKnown RBP7.44□□□□□ -1.22
NECAP1-207ENST00000544891 RBMY1EA6NEQ0 496 aaKnown RBP7.44□□□□□ -1.22
NECAP1-207ENST00000544891 RBMY1DP0C7P1 496 aaKnown RBP7.44□□□□□ -1.22
NECAP1-207ENST00000544891 RBMY1A1P0DJD3 496 aaKnown RBP7.44□□□□□ -1.22
NECAP1-207ENST00000544891 RBMY1CP0DJD4 496 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms