RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CREBBPQ92793 2442 aa10.58□□□□□ -0.72
CHD4-211ENST00000544484 OR11H12B2RN74 326 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 LHFPL1Q86WI0 220 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 OR11H1Q8NG94 326 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 OR11H2Q8NH07 326 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 PRSS22Q9GZN4 317 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.57□□□□□ -0.729e-7■■■■□ 21.3
CHD4-211ENST00000544484 MED13LQ71F56 2210 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 TMEM178BH3BS89 294 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 FNDC1Q4ZHG4 1894 aaPredicted RBP10.57□□□□□ -0.72
CHD4-211ENST00000544484 TRAV3A0A0B4J244 114 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 EPDR1Q9UM22 224 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 CD7P09564 240 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 MYOD1P15172 320 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 FOXC2Q99958 501 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 WDR83OSQ9Y284 106 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 RFNGQ9Y644 331 aa10.57□□□□□ -0.72
CHD4-211ENST00000544484 IGHV1-8P0DP01 117 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 MPZP25189 248 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 CTAG1AP78358 180 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 PVRIGQ6DKI7 326 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 C21orf62-AS1Q17RA5 79 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 HEPN1Q6WQI6 88 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 ZNF600Q6ZNG1 722 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 NEUROG1Q92886 237 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 BRD3OSQ6XYD6 125 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 VMO1Q7Z5L0 202 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 OR13C6PQ8NH95 151 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 TRGV2A0A075B6R0 118 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 IZUMO1RA6ND01 250 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 CA1P00915 261 aaPredicted RBP10.56□□□□□ -0.72
CHD4-211ENST00000544484 KLF17Q5JT82 389 aaPredicted RBP10.56□□□□□ -0.72
CHD4-211ENST00000544484 PAPPA-AS1Q5QFB9 102 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 DOCK9Q9BZ29 2069 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 FABP5P3A8MUU1 101 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 H7C1H1 209 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 OCC1Q8TAD7 63 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
CHD4-211ENST00000544484 HGFACQ04756 655 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 ARTNQ5T4W7 220 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 PMCHL2Q9BQD1 86 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 K7ERU9 68 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 PLP1P60201 277 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 ZNF474Q6S9Z5 364 aaPredicted RBP10.55□□□□□ -0.72
CHD4-211ENST00000544484 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 WNT2P09544 360 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 PEMTQ9UBM1 199 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 PSG8Q9UQ74 426 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 ZNF585BQ52M93 769 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 TOMM7Q9P0U1 55 aa10.55□□□□□ -0.72
CHD4-211ENST00000544484 EFNA4P52798 201 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 C1QL4Q86Z23 238 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 FANCMQ8IYD8 2048 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 A0A087WWC5 75 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 IGHV1-3A0A0C4DH29 117 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 SERF1AO75920 110 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 TMEM50AO95807 157 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 PRR30Q53SZ7 412 aaPredicted RBP10.54□□□□□ -0.72
CHD4-211ENST00000544484 TMEM167AQ8TBQ9 72 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 RPL15P61313 204 aaKnown RBP10.54□□□□□ -0.72
CHD4-211ENST00000544484 FAM166AQ6J272 317 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 Q6ZS92 163 aa10.54□□□□□ -0.72
CHD4-211ENST00000544484 MBD3L4A6NDZ8 208 aaPredicted RBP10.53□□□□□ -0.72
CHD4-211ENST00000544484 MBD3L3A6NE82 208 aaPredicted RBP10.53□□□□□ -0.72
CHD4-211ENST00000544484 MBD3L5A6NJ08 208 aaPredicted RBP10.53□□□□□ -0.72
CHD4-211ENST00000544484 LINC00473A8K010 186 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 STHQ8IWL8 128 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 MBD3L2Q8NHZ7 208 aaPredicted RBP10.53□□□□□ -0.72
CHD4-211ENST00000544484 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 GGTLC1Q9BX51 225 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 DMRT1Q9Y5R6 373 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 PAX8Q06710 450 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 ERASQ7Z444 233 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 COQ2Q96H96 371 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 SLC50A1Q9BRV3 221 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 SIP14410 1827 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 IGKV3D-20A0A0C4DH25 116 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 A0A1W2PRE2 83 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 ADMP35318 185 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 LYPD2Q6UXB3 125 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 ZSWIM8A7E2V4 1837 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 NDUFA3O95167 84 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 UNQ6494/PRO21346Q6UXR6 183 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 TNFRSF14Q92956 283 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 WISP1O95388 367 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 JOSD1Q15040 202 aaPredicted RBP10.53□□□□□ -0.72
CHD4-211ENST00000544484 NSUN5P1Q3KNT7 163 aa10.53□□□□□ -0.72
CHD4-211ENST00000544484 IGKV1D-17A0A075B6S4 117 aa10.52□□□□□ -0.72
CHD4-211ENST00000544484 TRAV41A0A0B4J266 112 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms