RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 RPEQ96AT9 228 aa14.17□□□□□ -0.14
SCARB1-208ENST00000544327 RNASE7Q9H1E1 156 aaKnown RBP14.17□□□□□ -0.14
SCARB1-208ENST00000544327 LAMA5O15230 3695 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 SMIM27A0A1W2PRY6 76 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 PEX7O00628 323 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 IGHV3-48P01763 117 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 MT-ND6P03923 174 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 LIPFP07098 398 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 RD3LP0DJH9 198 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 DLX1P56177 255 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 ADORA2A-AS1P86434 159 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 WDR73Q6P4I2 378 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 OR8I2Q8N0Y5 310 aa14.16□□□□□ -0.14
SCARB1-208ENST00000544327 TSTD3H0UI37 97 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 COX7A1P24310 79 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 IBA57Q5T440 356 aaKnown RBP14.15□□□□□ -0.14
SCARB1-208ENST00000544327 RUSC1-AS1Q66K80 236 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 TMEM256Q8N2U0 113 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 RAB1BQ9H0U4 201 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 ROS1P08922 2347 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 MOSP00540 346 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 Q0VG73 95 aa14.15□□□□□ -0.14
SCARB1-208ENST00000544327 PKDREJQ9NTG1 2253 aa14.14□□□□□ -0.15
SCARB1-208ENST00000544327 IER3P46695 156 aa14.14□□□□□ -0.15
SCARB1-208ENST00000544327 OR11H6Q8NGC7 330 aa14.14□□□□□ -0.15
SCARB1-208ENST00000544327 TP53TG3Q9ULZ0 132 aa14.14□□□□□ -0.15
SCARB1-208ENST00000544327 SNURFLB1AK76 121 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 FCN1O00602 326 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 HYPMO75409 117 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 ATMQ13315 3056 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 TMEM183BQ1AE95 376 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 TPTE2P1Q5T6R2 138 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 C11orf71Q6IPW1 123 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 LURAP1LQ8IV03 231 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 OR1B1Q8NGR6 318 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 SRSF12Q8WXF0 261 aaKnown RBP14.13□□□□□ -0.15
SCARB1-208ENST00000544327 MBD6Q96DN6 1003 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 SMIM12Q96EX1 92 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 RAXQ9Y2V3 346 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 MGST1P10620 155 aaKnown RBP14.13□□□□□ -0.15
SCARB1-208ENST00000544327 CRISP2P16562 243 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 DEFA6Q01524 100 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 CMTM2Q8TAZ6 248 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 FBXL15Q9H469 300 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 CBLN4Q9NTU7 201 aa14.13□□□□□ -0.15
SCARB1-208ENST00000544327 POLEQ07864 2286 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 PTPRQQ9UMZ3 2332 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 NAV3Q8IVL0 2385 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 A0A1B0GUS0 222 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 M0R1W7 72 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 NUPR1O60356 82 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 ORM2P19652 201 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 DDTP30046 118 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 RAB4BP61018 213 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 PAFAH1B2P68402 229 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 PRB3Q04118 309 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-208ENST00000544327 FXYD3Q14802 87 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 CDSNQ15517 529 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 IQCJQ1A5X6 159 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 TMEM136Q6ZRR5 245 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 C19orf35Q6ZS72 473 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 NEU4Q8WWR8 484 aaPredicted RBP14.12□□□□□ -0.15
SCARB1-208ENST00000544327 TIMD4Q96H15 378 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 ONECUT1Q9UBC0 465 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 KLF12Q9Y4X4 402 aa14.12□□□□□ -0.15
SCARB1-208ENST00000544327 IZUMO1RA6ND01 250 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 I3L2K1 104 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 AMY1AP04745 511 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 GP9P14770 177 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 LINC00310P59036 64 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 BAGE2Q86Y30 109 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 LINC00479Q96M42 142 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 NOL4LQ96MY1 436 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-208ENST00000544327 CHRDL1Q9BU40 450 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 C7orf69Q9H7B7 122 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 EPDR1Q9UM22 224 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 MALRD1Q5VYJ5 2156 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 GRIFINA4D1Z8 144 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 ZNF705GA8MUZ8 300 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-208ENST00000544327 FRMD6-AS1P0C7T7 363 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 IGLC1P0CG04 106 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 HTR1DP28221 377 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 RANP62826 216 aaKnown RBP14.11□□□□□ -0.15
SCARB1-208ENST00000544327 LDLRAD2Q5SZI1 272 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 RASL11AQ6T310 242 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 REC114Q7Z4M0 266 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 WIPF2Q8TF74 440 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-208ENST00000544327 TMEM190Q8WZ59 177 aa14.11□□□□□ -0.15
SCARB1-208ENST00000544327 COL25A1Q9BXS0 654 aaPredicted RBP14.11□□□□□ -0.15
SCARB1-208ENST00000544327 MAP1BP46821 2468 aaKnown RBP14.1□□□□□ -0.15
SCARB1-208ENST00000544327 TIMM23O14925 209 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 NBEAP1P0C6P0 100 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 TPPP2P59282 170 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 ZNF664Q8N3J9 261 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 NPBQ8NG41 125 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 CFHR4Q92496 578 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 GRAMD2BQ96HH9 432 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 DPM3Q9P2X0 92 aa14.1□□□□□ -0.15
SCARB1-208ENST00000544327 ODF3BA8MYP8 253 aa14.09□□□□□ -0.15
SCARB1-208ENST00000544327 HLA-DQA1P01909 254 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms