RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 VWC2Q2TAL6 325 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 MIC13Q5XKP0 118 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 OR4A16Q8NH70 328 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 OCC1Q8TAD7 63 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 TXNDC17Q9BRA2 123 aa12.2□□□□□ -0.46
CHFR-223ENST00000544268 C17orf100A8MU93 164 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 K7ERU9 68 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 LHBP01229 141 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 PMCHP20382 165 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 STUMQ69YW2 141 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 TREML4Q6UXN2 200 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 NIT1Q86X76 327 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 PSG1P11464 419 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 LGALS7P47929 136 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 THBS3P49746 956 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 ITLN2Q8WWU7 325 aaPredicted RBP12.19□□□□□ -0.46
CHFR-223ENST00000544268 MGST2Q99735 147 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
CHFR-223ENST00000544268 MT-ND6P03923 174 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 VDAC2P45880 294 aaPredicted RBP12.18□□□□□ -0.46
CHFR-223ENST00000544268 PRR27Q6MZM9 219 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 S1PR3Q99500 378 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 DYSFO75923 2080 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 CA2P00918 260 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 SPATA31B1PQ5VZV4 182 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 OR4P4Q8NGL7 312 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 DDB2Q92466 427 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 ZNF479Q96JC4 524 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
CHFR-223ENST00000544268 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 F2RL2O00254 374 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 SLC17A3O00476 420 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 IGKV1-16P04430 117 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 FRMD6-AS1P0C7T7 363 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 CGB3P0DN86 165 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 CGB7P0DN87 165 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
CHFR-223ENST00000544268 ZNF596Q8TC21 504 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 RCHY1Q96PM5 261 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 RNF7Q9UBF6 113 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 HRNRQ86YZ3 2850 aaPredicted RBP12.17□□□□□ -0.46
CHFR-223ENST00000544268 LOC102724200A0A096LPH7 203 aaPredicted RBP12.17□□□□□ -0.46
CHFR-223ENST00000544268 TOX4O94842 621 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 RHOBP62745 196 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 RPEL1Q2QD12 228 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 RAB1CQ92928 201 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 TCF19Q9Y242 345 aa12.17□□□□□ -0.46
CHFR-223ENST00000544268 ARL14EPLP0DKL9 152 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 COX19Q49B96 90 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 BBC3Q96PG8 261 aaPredicted RBP12.16□□□□□ -0.46
CHFR-223ENST00000544268 DYNLRB1Q9NP97 96 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 NAT8BQ9UHF3 227 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
CHFR-223ENST00000544268 SRRM4A7MD48 611 aaKnown RBP12.16□□□□□ -0.46
CHFR-223ENST00000544268 TAX1BP3O14907 124 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 FOXH1O75593 365 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 FCN3O75636 299 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 PRB1P04280 392 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 CR1LQ2VPA4 569 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 SHISA2Q6UWI4 295 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 GAFA1Q96PS6 74 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 GGTLC1Q9BX51 225 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 CLEC7AQ9BXN2 247 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 MEGF9Q9H1U4 602 aa12.16□□□□□ -0.46
CHFR-223ENST00000544268 PLXNB1O43157 2135 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 TANC2Q9HCD6 1990 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 EFNB3Q15768 340 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 MLANAQ16655 118 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
CHFR-223ENST00000544268 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
CHFR-223ENST00000544268 KBTBD11-OT1A0A1B0GTJ5 212 aa12.15□□□□□ -0.47
CHFR-223ENST00000544268 ERVK-16P61578 105 aa12.15□□□□□ -0.47
CHFR-223ENST00000544268 OR4S2Q8NH73 311 aa12.15□□□□□ -0.47
CHFR-223ENST00000544268 TSKUQ8WUA8 353 aa12.15□□□□□ -0.47
CHFR-223ENST00000544268 FLNCQ14315 2725 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 B9A039 149 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 H0YJW9 148 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 K7EN84 100 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 TCF24Q7RTU0 167 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 LY96Q9Y6Y9 160 aa12.14□□□□□ -0.47
CHFR-223ENST00000544268 A0A1B0GV72 72 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 IGLL1P15814 213 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 GATA2P23769 480 aaPredicted RBP12.13□□□□□ -0.47
CHFR-223ENST00000544268 LCN12Q6JVE5 192 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 TMEM136Q6ZRR5 245 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 SPTAN1Q13813 2472 aaKnown RBP12.13□□□□□ -0.47
CHFR-223ENST00000544268 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 A0A1W2PPV4 95 aa12.13□□□□□ -0.47
CHFR-223ENST00000544268 REG1BP48304 166 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms