RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SPSB2Q99619 263 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 TRGV1A0A0A0MS02 117 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 SOCS3O14543 225 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 MRPL52Q86TS9 123 aaKnown RBP8.66□□□□□ -1.02
PCDH9-204ENST00000544246 PLPPR1Q8TBJ4 325 aa8.66□□□□□ -1.02
PCDH9-204ENST00000544246 TNFSF13O75888 250 aa8.65□□□□□ -1.02
PCDH9-204ENST00000544246 NAA38Q9BRA0 125 aaKnown RBP8.65□□□□□ -1.02
PCDH9-204ENST00000544246 WNT2P09544 360 aa8.65□□□□□ -1.02
PCDH9-204ENST00000544246 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
PCDH9-204ENST00000544246 FAM181AQ8N9Y4 354 aa8.65□□□□□ -1.02
PCDH9-204ENST00000544246 KIAA1217Q5T5P2 1943 aa8.65□□□□□ -1.02
PCDH9-204ENST00000544246 GTSF1LQ9H1H1 148 aa8.65□□□□□ -1.02
PCDH9-204ENST00000544246 DEFB121Q5J5C9 76 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 ZNF474Q6S9Z5 364 aaPredicted RBP8.65□□□□□ -1.03
PCDH9-204ENST00000544246 FBLIM1Q8WUP2 373 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 NEUROG3Q9Y4Z2 214 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 A0A0G2JK05 382 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 D6R8Y8 96 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 C1QCP02747 245 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 CDKN1AP38936 164 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 ZNF124Q15973 351 aa8.65□□□□□ -1.03
PCDH9-204ENST00000544246 PLXNA1Q9UIW2 1896 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 IGKV2-40A0A087WW87 121 aaPredicted RBP8.64□□□□□ -1.03
PCDH9-204ENST00000544246 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 IQCF6A8MYZ5 107 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 VCYO14598 125 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 YPEL1O60688 119 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 IGKV2D-40P01614 121 aaPredicted RBP8.64□□□□□ -1.03
PCDH9-204ENST00000544246 GUSBP1Q15486 140 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 RASL11AQ6T310 242 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 C1QL2Q7Z5L3 287 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 OR10W1Q8NGF6 305 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 YPEL2Q96QA6 119 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 TMEM133Q9H2Q1 129 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 NCR2O95944 276 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 TCTEX1D4Q5JR98 221 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 SAP25Q8TEE9 199 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 C17orf100A8MU93 164 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 IGHV3-53P01767 116 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 CSRP2Q16527 193 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 TIMM21Q9BVV7 248 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 CRIM1Q9NZV1 1036 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 MLNRO43193 412 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 LINC01590Q5TEZ4 76 aa8.64□□□□□ -1.03
PCDH9-204ENST00000544246 SLC25A48Q6ZT89 311 aaKnown RBP8.64□□□□□ -1.03
PCDH9-204ENST00000544246 TTC3P53804 2025 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 CD5P06127 495 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 TPTE2P1Q5T6R2 138 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 C1QTNF5Q9BXJ0 243 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 TRAV41A0A0B4J266 112 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 PRCDQ00LT1 54 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 FAM90A9PA6NNJ1 464 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
PCDH9-204ENST00000544246 DMRTC2Q8IXT2 367 aaPredicted RBP8.63□□□□□ -1.03
PCDH9-204ENST00000544246 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 UBE2CO00762 179 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 CCL3L1P16619 93 aa8.63□□□□□ -1.03
PCDH9-204ENST00000544246 TEX38Q6PEX7 206 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 SLC25A45Q8N413 288 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 C11orf44Q8N8P7 122 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 FDCSPQ8NFU4 85 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 C1orf159Q96HA4 380 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 SLC25A39Q9BZJ4 359 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-204ENST00000544246 C9JAW5 83 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BKO60814 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BJP06899 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 THBDP07204 575 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BOP23527 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BBP33778 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BDP58876 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BCP62807 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 EFNB3Q15768 340 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST2H2BEQ16778 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-204ENST00000544246 TMEM105Q8N8V8 129 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BHQ93079 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BNQ99877 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 HIST1H2BMQ99879 126 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 CSTL1Q9H114 145 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 PRIMA1Q86XR5 153 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 TRBV6-7A0A0A0MS04 114 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 TRACP01848 142 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 LHX2P50458 406 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 ATG2BQ96BY7 2078 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 PRB3Q04118 309 aaPredicted RBP8.62□□□□□ -1.03
PCDH9-204ENST00000544246 RPRMLQ8N4K4 120 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 CHAC1Q9BUX1 264 aa8.62□□□□□ -1.03
PCDH9-204ENST00000544246 RNF222A6NCQ9 220 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 MORN2Q502X0 79 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 LYZL1Q6UWQ5 148 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 NKAPP1Q8N9T2 125 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 DEFB104AQ8WTQ1 72 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 TCRAP04437 139 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 SELLP14151 372 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 IGHV1-2P23083 117 aa8.61□□□□□ -1.03
PCDH9-204ENST00000544246 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms