RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
CD9-210ENST00000543916 PMS2P5A8MQ11 134 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 ZNF207O43670 478 aaKnown RBP11.44□□□□□ -0.58
CD9-210ENST00000543916 TSC22D2O75157 780 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 CBLN1P23435 193 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 OR10J1P30954 320 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 GAMTQ14353 236 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 TMEM14EPQ6UXP3 125 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 ZNF600Q6ZNG1 722 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 C20orf24Q9BUV8 137 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 ZFAND3Q9H8U3 227 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 NOTCH3Q9UM47 2321 aa11.44□□□□□ -0.58
CD9-210ENST00000543916 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 YIF1AO95070 293 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 METTL15P1P0C7V9 234 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 ELLP55199 621 aaPredicted RBP11.43□□□□□ -0.58
CD9-210ENST00000543916 OR8G2PQ6IF36 304 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 TOMM20LQ6UXN7 152 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 OR1S2Q8NGQ3 325 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 SLC35E1Q96K37 410 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 NMES1Q9C002 83 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 DAZ1Q9NQZ3 744 aaKnown RBP11.43□□□□□ -0.58
CD9-210ENST00000543916 MLXQ9UH92 298 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 PUS1Q9Y606 427 aaKnown RBP eCLIP11.43□□□□□ -0.58
CD9-210ENST00000543916 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
CD9-210ENST00000543916 IGKV1D-37A0A075B6S9 117 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 WI2-2373I1.2A0A1W2PRP0 233 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 L7N2F9 121 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 C8orf88P0DMB2 117 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 VAMP2P63027 116 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 ACOT7LQ6ZUV0 252 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 DYNLRB2Q8TF09 96 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 PRR25Q96S07 402 aa11.42□□□□□ -0.58
CD9-210ENST00000543916 K7EMT4 169 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 DEDDO75618 318 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 CXCL3P19876 107 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 YPEL3P61236 119 aaPredicted RBP11.41□□□□□ -0.58
CD9-210ENST00000543916 ARL16Q0P5N6 197 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 DEFB114Q30KQ6 69 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 LRRC37A5PQ49AS3 106 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 MARC2Q969Z3 335 aa11.41□□□□□ -0.58
CD9-210ENST00000543916 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
CD9-210ENST00000543916 ZMAT5Q9UDW3 170 aaKnown RBP11.41□□□□□ -0.58
CD9-210ENST00000543916 ZNF256Q9Y2P7 627 aaPredicted RBP11.41□□□□□ -0.58
CD9-210ENST00000543916 IGKV1OR2-108A0A075B7D4 117 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 FAM24AA6NFZ4 105 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 H0YIZ8 118 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 SCAF4O95104 1147 aaKnown RBP11.4□□□□□ -0.58
CD9-210ENST00000543916 PVALBP20472 110 aaPredicted RBP11.4□□□□□ -0.58
CD9-210ENST00000543916 BCAP31P51572 246 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 CAV2P51636 162 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 CYCSP99999 105 aaKnown RBP11.4□□□□□ -0.58
CD9-210ENST00000543916 FCN2Q15485 313 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 CD300EQ496F6 205 aaPredicted RBP11.4□□□□□ -0.58
CD9-210ENST00000543916 BTNL8Q6UX41 500 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 THAP8Q8NA92 274 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 OR11H7Q8NGC8 314 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 MED28Q9H204 178 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 TECRQ9NZ01 308 aaKnown RBP11.4□□□□□ -0.58
CD9-210ENST00000543916 OR5AC2Q9NZP5 309 aa11.4□□□□□ -0.58
CD9-210ENST00000543916 IGHV3-49A0A0A0MS15 119 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 IGSF23A1L1A6 192 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 ZFP92A6NM28 416 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 K7EIL1 84 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 TOMM40O96008 361 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 RRAS2P62070 204 aaPredicted RBP11.39□□□□□ -0.59
CD9-210ENST00000543916 DLK1P80370 383 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 ZNF90Q03938 601 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 OR10P1Q8NGE3 313 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 OR2K2Q8NGT1 345 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 PPP1R1CQ8WVI7 109 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 GINS3Q9BRX5 216 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 LYRM2Q9NU23 88 aaPredicted RBP11.39□□□□□ -0.59
CD9-210ENST00000543916 SMPXQ9UHP9 88 aa11.39□□□□□ -0.59
CD9-210ENST00000543916 TRAV14DV4A0A0A6YYC5 116 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 CST7O76096 145 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 APOHP02749 345 aaPredicted RBP11.38□□□□□ -0.59
CD9-210ENST00000543916 PSG1P11464 419 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 GP9P14770 177 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 AKR1C1Q04828 323 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 TMEM61Q8N0U2 210 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 Q8WTZ3 238 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 TRGV9Q99603 122 aa11.38□□□□□ -0.59
CD9-210ENST00000543916 IGHV3OR16-13A0A075B7E8 117 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 IGHV3-74A0A0B4J1X5 117 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 SMCO3A2RU48 225 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 CHEK1O14757 476 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 RLN2P04090 185 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 IL4P05112 153 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 RD3LP0DJH9 198 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 SLC38A11Q08AI6 406 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
CD9-210ENST00000543916 TMEM144Q7Z5S9 345 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 TMEM252Q8N6L7 170 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
CD9-210ENST00000543916 ZNF785A8K8V0 405 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms