RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 PPIAL4GP0DN37 164 aa12.92□□□□□ -0.34
SCNN1A-221ENST00000543768 MRPL52Q86TS9 123 aaKnown RBP12.92□□□□□ -0.34
SCNN1A-221ENST00000543768 POLR3KQ9Y2Y1 108 aaPredicted RBP12.92□□□□□ -0.34
SCNN1A-221ENST00000543768 INSIG2Q9Y5U4 225 aa12.92□□□□□ -0.34
SCNN1A-221ENST00000543768 ABCA4P78363 2273 aa12.92□□□□□ -0.34
SCNN1A-221ENST00000543768 ANKHD1Q8IWZ3 2542 aaKnown RBP12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 TCRBV4S1A1TA0A5B7 111 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 HELTA6NFD8 242 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 RUSC1-AS1Q66K80 236 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 PATE2Q6UY27 113 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 MMD2Q8IY49 270 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 GBGT1Q8N5D6 347 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 C8orf46Q8TAG6 207 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 BTF3L4Q96K17 158 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 RNF2Q99496 336 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 DCHS2Q6V1P9 2916 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 SPTA1P02549 2419 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 IGF2RP11717 2491 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 A0A1W2PRE2 83 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 SCGB1D1O95968 90 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 LINC00614P0C842 121 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 MFAP2P55001 183 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 NHLH1Q02575 133 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
SCNN1A-221ENST00000543768 RBP4P02753 201 aa12.9□□□□□ -0.34
SCNN1A-221ENST00000543768 SUMO1P63165 101 aaKnown RBP12.9□□□□□ -0.34
SCNN1A-221ENST00000543768 HCP5Q6MZN7 132 aa12.9□□□□□ -0.34
SCNN1A-221ENST00000543768 SLC17A3O00476 420 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 CRYGCP07315 174 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 NPSP0C0P6 89 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 RPL27AP46776 148 aaKnown RBP12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 TNXAQ16473 311 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 LY6HO94772 140 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 COX7A1P24310 79 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 PCP4P48539 62 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 OR5I1Q13606 314 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 CENPWQ5EE01 88 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 OR5AU1Q8NGC0 362 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 IL36BQ9NZH7 164 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
SCNN1A-221ENST00000543768 C22orf46C9J442 243 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 COX7A2P2O60397 106 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 COMPP49747 757 aaPredicted RBP12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 GNG4P50150 75 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 CNN1P51911 297 aaKnown RBP12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 SELENOTP62341 195 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 C10orf113Q5VZT2 155 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 OR1L4Q8NGR5 311 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 ZNF355PQ9NSJ1 428 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 TRAPPC1Q9Y5R8 145 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 TPRP12270 2363 aaKnown RBP12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 LY6LH3BQJ8 138 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 OR8B3Q8NGG8 313 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 OR8B2Q96RD0 313 aa12.88□□□□□ -0.35
SCNN1A-221ENST00000543768 A6NNC1 897 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 APELAP0DMC3 54 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 ZNF705AQ6ZN79 300 aaPredicted RBP12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 PPP1R27Q86WC6 154 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 V9GYV3 84 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 ARHGAP32A7KAX9 2087 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 PYYP10082 97 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 LDLRAD2Q5SZI1 272 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 ETFRF1Q6IPR1 90 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 RPEQ96AT9 228 aa12.87□□□□□ -0.35
SCNN1A-221ENST00000543768 IGLV2-8P01709 118 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 YPEL3P61236 119 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 ANKRD39Q53RE8 183 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 RAB1BQ9H0U4 201 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 TACC2O95359 2948 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 TRAV9-1A0A075B6T8 112 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 TEX22C9J3V5 150 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 LIPFP07098 398 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 LGALS4P56470 323 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 BPIFB3P59826 476 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 IGF2BP2-AS1Q96M15 143 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 PAXXQ9BUH6 204 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 AMMECR1Q9Y4X0 333 aaPredicted RBP12.86□□□□□ -0.35
SCNN1A-221ENST00000543768 NBASA2RRP1 2371 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 MOSP00540 346 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 C11orf71Q6IPW1 123 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 ARL6IP6Q8N6S5 226 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 TMEM116Q8NCL8 245 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 FBXL15Q9H469 300 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 ATRXP46100 2492 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 ZNF705FA8MVS1 300 aaPredicted RBP12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 FCN1O00602 326 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 ZNF705DP0CH99 300 aaPredicted RBP12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 ZNF705BP0CI00 300 aaPredicted RBP12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 LINC00305Q7Z4B0 112 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 TBX15Q96SF7 602 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 TRGV9Q99603 122 aa12.85□□□□□ -0.35
SCNN1A-221ENST00000543768 PAX2Q02962 417 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms