RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 TMEM18Q96B42 140 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 TIMD4Q96H15 378 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 IGF2BP2-AS1Q96M15 143 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 TRGV9Q99603 122 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
PTPN6-222ENST00000543744 OSTCQ9NRP0 149 aa14.24□□□□□ -0.13
PTPN6-222ENST00000543744 TPRP12270 2363 aaKnown RBP14.23□□□□□ -0.13
PTPN6-222ENST00000543744 LY6LH3BQJ8 138 aa14.23□□□□□ -0.13
PTPN6-222ENST00000543744 ADMP35318 185 aa14.23□□□□□ -0.13
PTPN6-222ENST00000543744 OR1B1Q8NGR6 318 aa14.23□□□□□ -0.13
PTPN6-222ENST00000543744 PERPQ96FX8 193 aa14.23□□□□□ -0.13
PTPN6-222ENST00000543744 RNF5Q99942 180 aa14.23□□□□□ -0.13
PTPN6-222ENST00000543744 FBXL15Q9H469 300 aa14.23□□□□□ -0.13
PTPN6-222ENST00000543744 F11RQ9Y624 299 aaKnown RBP14.23□□□□□ -0.13
PTPN6-222ENST00000543744 TRAV20A0A0B4J274 112 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 TEX22C9J3V5 150 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 ISLRO14498 428 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 IGLV2-8P01709 118 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 MGST1P10620 155 aaKnown RBP14.22□□□□□ -0.13
PTPN6-222ENST00000543744 CBLN1P23435 193 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 TAS2R60P59551 318 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 NHLH1Q02575 133 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 STXBP6Q8NFX7 210 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 OR5R1Q8NH85 324 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 FXYD5Q96DB9 178 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 CBLN4Q9NTU7 201 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 CDC42EP3Q9UKI2 254 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 IGHV3-21A0A0B4J1V1 117 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 PLGLAQ15195 96 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 ZNF329Q86UD4 541 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 OR8I2Q8N0Y5 310 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 OR1L6Q8NGR2 347 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 PLXNB1O43157 2135 aa14.22□□□□□ -0.13
PTPN6-222ENST00000543744 GBGT1Q8N5D6 347 aa14.21□□□□□ -0.13
PTPN6-222ENST00000543744 SRSF12Q8WXF0 261 aaKnown RBP14.21□□□□□ -0.13
PTPN6-222ENST00000543744 GZMBP10144 247 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 RPL19P84098 196 aaKnown RBP14.2□□□□□ -0.14
PTPN6-222ENST00000543744 PAX2Q02962 417 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 FXYD3Q14802 87 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 IBA57Q5T440 356 aaKnown RBP14.2□□□□□ -0.14
PTPN6-222ENST00000543744 TPTE2P1Q5T6R2 138 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 LINC00479Q96M42 142 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 MRPL18Q9H0U6 180 aaKnown RBP14.2□□□□□ -0.14
PTPN6-222ENST00000543744 FCN1O00602 326 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 PEX7O00628 323 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 TIMM23O14925 209 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 HYPMO75409 117 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 HTR1DP28221 377 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 IER3P46695 156 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 ARF6P62330 175 aa14.2□□□□□ -0.14
PTPN6-222ENST00000543744 C9orf152Q5JTZ5 239 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 ABCA4P78363 2273 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 TRBV9A0A0B4J1U6 114 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 SNRPCP09234 159 aaKnown RBP14.19□□□□□ -0.14
PTPN6-222ENST00000543744 RANP62826 216 aaKnown RBP14.19□□□□□ -0.14
PTPN6-222ENST00000543744 CX3CL1P78423 397 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 LDLRAD2Q5SZI1 272 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 C11orf71Q6IPW1 123 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 TMEM256Q8N2U0 113 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 NHLRC2Q8NBF2 726 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 OR11H6Q8NGC7 330 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 NEU4Q8WWR8 484 aaPredicted RBP14.19□□□□□ -0.14
PTPN6-222ENST00000543744 SERTAD4Q9NUC0 356 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 DPM3Q9P2X0 92 aa14.19□□□□□ -0.14
PTPN6-222ENST00000543744 CNIH1O95406 144 aa14.18□□□□□ -0.14
PTPN6-222ENST00000543744 GNB1LQ9BYB4 327 aa14.18□□□□□ -0.14
PTPN6-222ENST00000543744 RELNP78509 3460 aa14.18□□□□□ -0.14
PTPN6-222ENST00000543744 A0A1B0GUS0 222 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 GRIFINA4D1Z8 144 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 SNURFLB1AK76 121 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 FRMD6-AS1P0C7T7 363 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 CEACAM3P40198 252 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 MYCNOSP40205 109 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 PKIAP61925 76 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 MMDQ15546 238 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 BAGE2Q86Y30 109 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 BLNKQ8WV28 456 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 SRSF8Q9BRL6 282 aaKnown RBP14.17□□□□□ -0.14
PTPN6-222ENST00000543744 SSBP3Q9BWW4 388 aaPredicted RBP14.17□□□□□ -0.14
PTPN6-222ENST00000543744 HILPDAQ9Y5L2 63 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 LOC105371242A0A075B767 164 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 ZNF705GA8MUZ8 300 aaPredicted RBP14.17□□□□□ -0.14
PTPN6-222ENST00000543744 TCL1AP56279 114 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 PLP1P60201 277 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 LHFPL4Q7Z7J7 247 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 GSX1Q9H4S2 264 aaPredicted RBP14.17□□□□□ -0.14
PTPN6-222ENST00000543744 LRBAP50851 2863 aa14.17□□□□□ -0.14
PTPN6-222ENST00000543744 TRAV34A0A0B4J273 112 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 M0R1W7 72 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 SPINK4O60575 86 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 NBEAP1P0C6P0 100 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 CRISP2P16562 243 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 WDR73Q6P4I2 378 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 WNT10AQ9GZT5 417 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 EPDR1Q9UM22 224 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 ATRXP46100 2492 aa14.16□□□□□ -0.14
PTPN6-222ENST00000543744 SMIM27A0A1W2PRY6 76 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 TSTD3H0UI37 97 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 I3L2K1 104 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 NBASA2RRP1 2371 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms