RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 C1orf196B1AJZ1 125 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 ZNF736B4DX44 427 aaPredicted RBP0.28□□□□□ -2.36
KNTC1-213ENST00000542727 PIRO00625 290 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 HIST1H1EP10412 219 aaKnown RBP0.28□□□□□ -2.36
KNTC1-213ENST00000542727 RHOBP62745 196 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 C1orf137Q5JT78 98 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 BRMS1LQ5PSV4 323 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 SOSTDC1Q6X4U4 206 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 KRT222Q8N1A0 295 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 C3orf56Q8N813 242 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 C6orf62Q9GZU0 229 aaPredicted RBP0.28□□□□□ -2.36
KNTC1-213ENST00000542727 MIXL1Q9H2W2 232 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 EPDR1Q9UM22 224 aa0.28□□□□□ -2.36
KNTC1-213ENST00000542727 SPTBP11277 2137 aa0.28□□□□□ -2.37
KNTC1-213ENST00000542727 MED1Q15648 1581 aaPredicted RBP0.28□□□□□ -2.37
KNTC1-213ENST00000542727 ARHGEF28Q8N1W1 1705 aaKnown RBP0.27□□□□□ -2.37
KNTC1-213ENST00000542727 DOCK4Q8N1I0 1966 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.27□□□□□ -2.37
KNTC1-213ENST00000542727 M0R2N4 97 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 INE1O15225 51 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 OR2J2O76002 312 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 IFNA5P01569 189 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 SULT1A1P50225 295 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 OR2F1Q13607 317 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 HIST3H3Q16695 136 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 CCDC122Q5T0U0 273 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 OR13D1Q8NGV5 346 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 OR10J5Q8NHC4 309 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 DCUN1D1Q96GG9 259 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 C8orf76Q96K31 380 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 TSPAN32Q96QS1 320 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 OR52E6Q96RD3 313 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 V9GYY5 206 aaPredicted RBP0.27□□□□□ -2.37
KNTC1-213ENST00000542727 NUP155O75694 1391 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 COL1A1P02452 1464 aaPredicted RBP0.27□□□□□ -2.37
KNTC1-213ENST00000542727 NUP98P52948 1817 aa0.27□□□□□ -2.37
KNTC1-213ENST00000542727 PTPRDP23468 1912 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 TRAV26-2A0A0B4J265 109 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 FAM236DA0A1B0GTK5 79 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 OR4C46A6NHA9 309 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 CHP2O43745 196 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 AHSA1O95433 338 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 OR4E1P0C645 316 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 FAM236CP0DP71 79 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 NKX2-5P52952 324 aaPredicted RBP0.26□□□□□ -2.37
KNTC1-213ENST00000542727 DEFA3P59666 94 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 LINC01554Q52M75 96 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 FAM74A1Q5RGS3 127 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 GKN2Q86XP6 184 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 CCDC90BQ9GZT6 254 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 UBAP1Q9NZ09 502 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 HS3ST2Q9Y278 367 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 UTP11Q9Y3A2 253 aaKnown RBP0.26□□□□□ -2.37
KNTC1-213ENST00000542727 MYO3BQ8WXR4 1341 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 MAP3K5Q99683 1374 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 ADGRB2O60241 1585 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 RIMBP3CA6NJZ7 1639 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 RIMBP3BA6NNM3 1639 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 RIMBP3Q9UFD9 1639 aa0.26□□□□□ -2.37
KNTC1-213ENST00000542727 USP24Q9UPU5 2620 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 N4BP2Q86UW6 1770 aaPredicted RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 A0A087X0T9 212 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 A0A1W2PPM0 123 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 OR2T8A6NH00 312 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 KLF7O75840 302 aaPredicted RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 RBP1P09455 135 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 SMIM17P0DL12 118 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 SMIM10L2AP0DMW4 78 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 SMIM10L2BP0DMW5 78 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 CASP1P29466 404 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 EFNA4P52798 201 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 YPEL3P61236 119 aaPredicted RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 PSG9Q00887 426 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 TSNQ15631 228 aaKnown RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 ESRGQ1W209 222 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 ACOT6Q3I5F7 207 aaPredicted RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 SPATA8Q6RVD6 105 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 TEX47Q8TBZ9 253 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 WFDC5Q8TCV5 224 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 C4orf3Q8WVX3 66 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 HIST1H2BLQ99880 126 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 CMSS1Q9BQ75 279 aaKnown RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 TMEM70Q9BUB7 260 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 TLNRD1Q9H1K6 362 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 NHP2Q9NX24 153 aaKnown RBP0.25□□□□□ -2.37
KNTC1-213ENST00000542727 TAS2R7Q9NYW3 318 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 TMEM14CQ9P0S9 112 aa0.25□□□□□ -2.37
KNTC1-213ENST00000542727 ZNF462Q96JM2 2506 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 NEO1Q92859 1461 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 ROBO3Q96MS0 1386 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 hCG_1818297A0A087WSY0 165 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 CLDN24A6NM45 220 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 A8MT66 165 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 CCL25O15444 150 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 GADD45GO95257 159 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 LYPLA2O95372 231 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 CNIH1O95406 144 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 IFNA16P05015 189 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 SERPINE1P05121 402 aa0.24□□□□□ -2.37
KNTC1-213ENST00000542727 ANP32AP39687 249 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms