RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 NAT1P18440 290 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 CALB2P22676 271 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 CRYBB3P26998 211 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 PPT1P50897 306 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 CLDN12P56749 244 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 SCAND1P57086 179 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 TAS2R43P59537 309 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 FLOT2Q14254 428 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 GAMTQ14353 236 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 Q499Y3 187 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 LINC01556Q5JQF7 62 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 OR10J3Q5JRS4 329 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 XAF1Q6GPH4 301 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 THOC7Q6I9Y2 204 aaKnown RBP2.05□□□□□ -2.08
CHD4-209ENST00000542717 FAM122CQ6P4D5 195 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 C16orf54Q6UWD8 224 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 SPARTQ8N0X7 666 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 NKAIN3Q8N8D7 197 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 DMBX1Q8NFW5 382 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 OR52I1Q8NGK6 324 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 OR10J5Q8NHC4 309 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 BLNKQ8WV28 456 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 TCTEX1D2Q8WW35 142 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 SMIM19Q96E16 107 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 C8orf49Q96NF6 230 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 GPHA2Q96T91 129 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 SLC29A1Q99808 456 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 GINS4Q9BRT9 223 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 HDHD3Q9BSH5 251 aaPredicted RBP2.05□□□□□ -2.08
CHD4-209ENST00000542717 TMEM59Q9BXS4 323 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 FAM107BQ9H098 131 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 MRPS18AQ9NVS2 196 aaKnown RBP2.05□□□□□ -2.08
CHD4-209ENST00000542717 ARGLU1Q9NWB6 273 aaPredicted RBP2.05□□□□□ -2.08
CHD4-209ENST00000542717 DOK5Q9P104 306 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 AK3Q9UIJ7 227 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 ARL2BPQ9Y2Y0 163 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 NSG2Q9Y328 171 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 COX11Q9Y6N1 276 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 SSPOA2VEC9 5147 aa2.05□□□□□ -2.08
CHD4-209ENST00000542717 IGKV2D-24A0A075B6R9 120 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 IGKV1OR2-108A0A075B7D4 117 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 A0A087WYN8 130 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TRBV6-7A0A0A0MS04 114 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 A0A0A6YYD4 124 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TRAV8-1A0A0A6YYK1 113 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TRAV8-6A0A0B4J262 113 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 A0A0J9YX75 114 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 A0A1W2PPK0 400 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TMEM235A6NFC5 223 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 FABP7O15540 132 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 CRXO43186 299 aaPredicted RBP2.04□□□□□ -2.08
CHD4-209ENST00000542717 CLN5O75503 358 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 DIRAS3O95661 229 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 CD36P16671 472 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 GABRB1P18505 474 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 CELP19835 753 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 PSMB3P49720 205 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 GYS2P54840 703 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 RPS11P62280 158 aaKnown RBP eCLIP2.04□□□□□ -2.08
CHD4-209ENST00000542717 RHOBP62745 196 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 PRR3P79522 188 aaKnown RBP2.04□□□□□ -2.08
CHD4-209ENST00000542717 WT1-ASQ06250 92 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 ST3GAL4Q11206 333 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 SLAQ13239 276 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 SSX1Q16384 188 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TIMM50Q3ZCQ8 353 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 C4orf46Q504U0 113 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 C14orf177Q52M58 125 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TMPRSS11AQ6ZMR5 421 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 Q6ZTI0 123 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 LINC00612Q8N6U2 182 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 PRR26Q8N8Z3 221 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 OR11H7Q8NGC8 314 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 OR4A4PQ8NGN8 299 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 OR1L8Q8NGR8 309 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 RNASE8Q8TDE3 154 aaKnown RBP2.04□□□□□ -2.08
CHD4-209ENST00000542717 CHAC2Q8WUX2 184 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 LSM10Q969L4 123 aaKnown RBP2.04□□□□□ -2.08
CHD4-209ENST00000542717 RMI2Q96E14 147 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 PGLYRP3Q96LB9 341 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 C16orf92Q96LL3 132 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 VGLL1Q99990 258 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 CMSS1Q9BQ75 279 aaKnown RBP2.04□□□□□ -2.08
CHD4-209ENST00000542717 TXNDC17Q9BRA2 123 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 AIFM2Q9BRQ8 373 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 CABLES2Q9BTV7 478 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 SLC25A31Q9H0C2 315 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 LPAR5Q9H1C0 372 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 AMBNQ9NP70 447 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 C12orf4Q9NQ89 552 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 RPRMQ9NS64 109 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 BET1LQ9NYM9 111 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 PRO0255Q9UI72 69 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 SPATA2Q9UM82 520 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 HHLA3Q9XRX5 114 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 POMPQ9Y244 141 aa2.04□□□□□ -2.08
CHD4-209ENST00000542717 TRGV1A0A0A0MS02 117 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TRGV4A0A0C4DH28 118 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 TEX50A0A1B0GTY4 177 aa2.03□□□□□ -2.08
CHD4-209ENST00000542717 FOXI3A8MTJ6 420 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms