RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 IGLV2-8P01709 118 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 IGLC2P0DOY2 106 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 IGLC3P0DOY3 106 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 FOXC1Q12948 553 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 TCF24Q7RTU0 167 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 KIR3DL3Q8N743 410 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 OR10X1Q8NGY0 326 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 CORO2AQ92828 525 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 HARBI1Q96MB7 349 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 ISLRO14498 428 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 TM4SF5O14894 197 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 PCP4P48539 62 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 OSTCQ9NRP0 149 aa12.45□□□□□ -0.42
CNOT9-208ENST00000542068 ARHGAP32A7KAX9 2087 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 F2RL2O00254 374 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 MOSP00540 346 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 GUSBP1Q15486 140 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 TMEM108Q6UXF1 575 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 SLC25A33Q9BSK2 321 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 PRNDQ9UKY0 176 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 HLA-DQA1P01909 254 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 ESDP10768 282 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 LEMD1Q68G75 181 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 C18orf32Q8TCD1 76 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 ASCL2Q99929 193 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 SAP30LQ9HAJ7 183 aa12.44□□□□□ -0.42
CNOT9-208ENST00000542068 FAM90A9PA6NNJ1 464 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 UPK2O00526 184 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 MT-ND6P03923 174 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 PRRX1P54821 245 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 DIAPH2-AS1Q14236 149 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 MRPL20Q9BYC9 149 aaKnown RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 SLC25A10Q9UBX3 287 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 TRAV9-1A0A075B6T8 112 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 C20orf202A1L168 122 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 MBD3L4A6NDZ8 208 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 MBD3L3A6NE82 208 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 MBD3L5A6NJ08 208 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 NDUFB8O95169 186 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 PPOXP50336 477 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 HCP5Q6MZN7 132 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 RBMXL3Q8N7X1 1067 aaKnown RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 MBD3L2Q8NHZ7 208 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 COL27A1Q8IZC6 1860 aaPredicted RBP12.43□□□□□ -0.42
CNOT9-208ENST00000542068 TRBV9A0A0B4J1U6 114 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 LYNX1G3V0Z9 82 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 LYNX1P0DP58 116 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 PRCDQ00LT1 54 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 BSPH1Q075Z2 132 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 AARDQ4LEZ3 155 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 SPACA3Q8IXA5 215 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 OR5B3Q8NH48 314 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 OR8B2Q96RD0 313 aa12.43□□□□□ -0.42
CNOT9-208ENST00000542068 HIGD1CA8MV81 97 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 ARL2-SNX15V9GYD0 113 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
CNOT9-208ENST00000542068 IZUMO1RA6ND01 250 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
CNOT9-208ENST00000542068 RNASE2P10153 161 aaKnown RBP12.42□□□□□ -0.42
CNOT9-208ENST00000542068 OR10J3Q5JRS4 329 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 EBLN2Q6P2I7 272 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 PMCHL2Q9BQD1 86 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 SLC25A2Q9BXI2 301 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 ZFP30Q9Y2G7 519 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 SLC25A5P05141 298 aaKnown RBP12.42□□□□□ -0.42
CNOT9-208ENST00000542068 ZNF138P52744 262 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 OR1B1Q8NGR6 318 aa12.42□□□□□ -0.42
CNOT9-208ENST00000542068 MRPL36Q9P0J6 103 aaKnown RBP12.42□□□□□ -0.42
CNOT9-208ENST00000542068 CTRLP40313 264 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 UBE2G1P62253 170 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 RNF151Q2KHN1 245 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 C10orf113Q5VZT2 155 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 CSN3P07498 182 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 TCTAP57738 103 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 GSX1Q9H4S2 264 aaPredicted RBP12.41□□□□□ -0.42
CNOT9-208ENST00000542068 SELENOKQ9Y6D0 94 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 CSMD1Q96PZ7 3565 aa12.41□□□□□ -0.42
CNOT9-208ENST00000542068 hADV38S2A0JD32 116 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 NKX6-3A6NJ46 265 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 ERHP84090 104 aaKnown RBP12.4□□□□□ -0.42
CNOT9-208ENST00000542068 CD69Q07108 199 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 IGFL2Q6UWQ7 119 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 LINC00173Q6ZV60 143 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 PGLYRP4Q96LB8 373 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 IGF2BP2-AS1Q96M15 143 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 LY96Q9Y6Y9 160 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
CNOT9-208ENST00000542068 PEX7O00628 323 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms