RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RLN2P04090 185 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 SLC25A4P12235 298 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 ELK1P19419 428 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 BTCP35070 178 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 MYCNOSP40205 109 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 SPCS3P61009 180 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 RPL23AP62750 156 aaKnown RBP4.16□□□□□ -1.74
CPSF7-220ENST00000541963 CYCSP99999 105 aaKnown RBP4.16□□□□□ -1.74
CPSF7-220ENST00000541963 PEA15Q15121 130 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 FFAR4Q5NUL3 377 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF562Q6V9R5 426 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 ZNF695Q8IW36 515 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 H1FOOQ8IZA3 346 aaPredicted RBP4.16□□□□□ -1.74
CPSF7-220ENST00000541963 SAMD12Q8N8I0 201 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 WFDC9Q8NEX5 89 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 COQ8AQ8NI60 647 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 MAFIPQ8WZ33 124 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 CYYR1Q96J86 154 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 SLC25A21Q9BQT8 299 aaPredicted RBP4.16□□□□□ -1.74
CPSF7-220ENST00000541963 ALKBH7Q9BT30 221 aaPredicted RBP4.16□□□□□ -1.74
CPSF7-220ENST00000541963 MCRIP2Q9BUT9 160 aaKnown RBP4.16□□□□□ -1.74
CPSF7-220ENST00000541963 SMDT1Q9H4I9 107 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 PARP11Q9NR21 331 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 NECAP2Q9NVZ3 263 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 COMMD9Q9P000 198 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 ANXA10Q9UJ72 324 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 STAB1Q9NY15 2570 aa4.16□□□□□ -1.74
CPSF7-220ENST00000541963 IGHV7-81A0A0B4J1V7 117 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 TRAV41A0A0B4J266 112 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 BCL2L11O43521 198 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 CLN5O75503 358 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 NDUFB6O95139 128 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 CNIH1O95406 144 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 IGHG4P01861 327 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 TPT1P13693 172 aaKnown RBP4.15□□□□□ -1.75
CPSF7-220ENST00000541963 RPL35AP18077 110 aaKnown RBP4.15□□□□□ -1.75
CPSF7-220ENST00000541963 CXCL3P19876 107 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 AADACP22760 399 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 CNTFRP26992 372 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 S100A2P29034 98 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 PRSS3P35030 304 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 PSG5Q15238 335 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 VMA21Q3ZAQ7 101 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF876PQ49A33 203 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 AKIRIN2Q53H80 203 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 TCTEX1D4Q5JR98 221 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 TMEM69Q5SWH9 247 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 C10orf99Q6UWK7 81 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 SSX9Q7RTT3 188 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 PPP1R27Q86WC6 154 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 HOGA1Q86XE5 327 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 KCNRGQ8N5I3 272 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 ZNF645Q8N7E2 425 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 LRTM2Q8N967 370 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 KLHL30-AS1Q8NEE0 82 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 OR5AP2Q8NGF4 316 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 OR10G8Q8NGN5 311 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 STOML3Q8TAV4 291 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 CLCC1Q96S66 551 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 HSD17B10Q99714 261 aaKnown RBP4.15□□□□□ -1.75
CPSF7-220ENST00000541963 HSPB9Q9BQS6 159 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 MFFQ9GZY8 342 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 PARP12Q9H0J9 701 aaKnown RBP4.15□□□□□ -1.75
CPSF7-220ENST00000541963 FBXL15Q9H469 300 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 AUNIPQ9H7T9 357 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 SDF2L1Q9HCN8 221 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 NIT2Q9NQR4 276 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 WSB1Q9Y6I7 421 aa4.15□□□□□ -1.75
CPSF7-220ENST00000541963 IGKV1D-8A0A087WSZ0 117 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 A0A087WW49 117 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 ANKRD20A5PA0PJZ0 165 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 RNF222A6NCQ9 220 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 LINC00587B1AMM8 73 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 G3V4G9 280 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 SMLR1H3BR10 107 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 CCL24O00175 119 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 ARPC5O15511 151 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
CPSF7-220ENST00000541963 CFDP00746 253 aaPredicted RBP4.14□□□□□ -1.75
CPSF7-220ENST00000541963 CA2P00918 260 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 IFNA17P01571 189 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 IGKV1-16P04430 117 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 PET100P0DJ07 73 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 HLA-GP17693 338 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 CXCL2P19875 107 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 PSMB8P28062 276 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 FCGR2CP31995 323 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 DUTP33316 252 aaKnown RBP4.14□□□□□ -1.75
CPSF7-220ENST00000541963 KIR2DS2P43631 304 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 RAB9AP51151 201 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 TAS2R46P59540 309 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 TAS2R20P59543 309 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 TAS2R60P59551 318 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 FXYD3Q14802 87 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 RHEBQ15382 184 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 MSMO1Q15800 293 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 ECSCRQ19T08 205 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 ACTBL2Q562R1 376 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 UNQ5815/PRO19632Q6UWF5 114 aa4.14□□□□□ -1.75
CPSF7-220ENST00000541963 ALKAL2Q6UX46 152 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms