RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 ERVH48-1M5A8F1 160 aa8.9□□□□□ -0.99
GABRB3-204ENST00000541819 C1QTNF9P0C862 333 aa8.9□□□□□ -0.99
GABRB3-204ENST00000541819 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.99
GABRB3-204ENST00000541819 COL18A1P39060 1754 aa8.9□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF638Q14966 1978 aaKnown RBP8.9□□□□□ -0.99
GABRB3-204ENST00000541819 IGHV1-46P01743 117 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF672Q499Z4 452 aaPredicted RBP8.89□□□□□ -0.99
GABRB3-204ENST00000541819 LSM4Q9Y4Z0 139 aaKnown RBP8.89□□□□□ -0.99
GABRB3-204ENST00000541819 NPIPB5A8MRT5 1133 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 EIF4EBP2Q13542 120 aaPredicted RBP8.89□□□□□ -0.99
GABRB3-204ENST00000541819 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 SELENOKQ9Y6D0 94 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 OOSP1A8MZH6 123 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 Q5BKY6 102 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 TPTE2P1Q5T6R2 138 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 TEX38Q6PEX7 206 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 WBP1Q96G27 269 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 TMEM126AQ9H061 195 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 MYMXA0A1B0GTQ4 84 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 RAMP3O60896 148 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 TNFRSF6BO95407 300 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 RPL15P61313 204 aaKnown RBP8.89□□□□□ -0.99
GABRB3-204ENST00000541819 LCNL1Q6ZST4 164 aa8.89□□□□□ -0.99
GABRB3-204ENST00000541819 VCYO14598 125 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 SSBP2P81877 361 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF474Q6S9Z5 364 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-204ENST00000541819 GTF3AQ92664 365 aaKnown RBP8.88□□□□□ -0.99
GABRB3-204ENST00000541819 SRRM4A7MD48 611 aaKnown RBP8.88□□□□□ -0.99
GABRB3-204ENST00000541819 EFNB3Q15768 340 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 Q5PR19 223 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 PIP4P2Q8N4L2 257 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 C1orf159Q96HA4 380 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 SIPA1L3O60292 1781 aaPredicted RBP8.88□□□□□ -0.99
GABRB3-204ENST00000541819 FAM223BA6NKX1 122 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 SUMO4Q6EEV6 95 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 FAM223AQ8IWN6 122 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 GREM1O60565 184 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 GAGE2BQ13066 116 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 C2orf82Q6UX34 121 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 ZCCHC24Q8N2G6 241 aaKnown RBP8.88□□□□□ -0.99
GABRB3-204ENST00000541819 LINC00477Q96M19 166 aa8.88□□□□□ -0.99
GABRB3-204ENST00000541819 USMG5Q96IX5 58 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 SPRR3Q9UBC9 169 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 H3BUX3 64 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 MLNRO43193 412 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 CGB3P0DN86 165 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 PSG1P11464 419 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF138P52744 262 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 MRPL14Q6P1L8 145 aaKnown RBP8.87□□□□□ -0.99
GABRB3-204ENST00000541819 UBE2E2Q96LR5 201 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 GGTLC1Q9BX51 225 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 SNHG12Q9BXW3 62 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 CACNA1CQ13936 2221 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 PCM1Q15154 2024 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 TFF1P04155 84 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 PRTN3P24158 256 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 TMEM105Q8N8V8 129 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 IL18BPO95998 194 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 GNLYP22749 145 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 KLRD1Q13241 179 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 FCN3O75636 299 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 SLC25A16P16260 332 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 LINC01356Q8N9X3 169 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
GABRB3-204ENST00000541819 RNF5Q99942 180 aa8.87□□□□□ -0.99
GABRB3-204ENST00000541819 SLC25A48Q6ZT89 311 aaKnown RBP8.86□□□□□ -0.99
GABRB3-204ENST00000541819 NKAPP1Q8N9T2 125 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 OR10W1Q8NGF6 305 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 SLC25A39Q9BZJ4 359 aaPredicted RBP8.86□□□□□ -0.99
GABRB3-204ENST00000541819 DEPPQ9NTK1 212 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 SCN1AP35498 2009 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 IGKV1D-13A0A0B4J2D9 117 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 IGHV1-3A0A0C4DH29 117 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 LHBP01229 141 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 IGKV1-13P0DP09 117 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 ADAMTS7Q9UKP4 1686 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 IGHV1-8P0DP01 117 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
GABRB3-204ENST00000541819 D6R8Y8 96 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 NCR2O95944 276 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 TRIP11Q15643 1979 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 TRAV13-1A0A0B4J241 112 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 PMS2P5A8MQ11 134 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 M0R1W7 72 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 CD55P08174 381 aa8.86□□□□□ -0.99
GABRB3-204ENST00000541819 E9PQ18 207 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 DEFB130BP0DP73 79 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 DEFB130AP0DP74 79 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 TIMP3P35625 211 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 CFHR1Q03591 330 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 CSTL1Q9H114 145 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 A0A1B0GWJ7 208 aa8.85□□□□□ -0.99
GABRB3-204ENST00000541819 IGFBP3P17936 291 aaPredicted RBP8.85□□□□□ -0.99
GABRB3-204ENST00000541819 C1QL4Q86Z23 238 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms