RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 PROK2Q9HC23 129 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 MMP26Q9NRE1 261 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 CCL28Q9NRJ3 127 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 UQCC1Q9NVA1 299 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 RNF7Q9UBF6 113 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 HDGFL3Q9Y3E1 203 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 AP4S1Q9Y587 144 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 CSAG2Q9Y5P2 127 aa4.14□□□□□ -1.75
DDB1-219ENST00000541513 CHCHD2Q9Y6H1 151 aaPredicted RBP4.14□□□□□ -1.75
DDB1-219ENST00000541513 CACNA1CQ13936 2221 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 LRRK2Q5S007 2527 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 IGLV3-32A0A0A0MS00 114 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 IGHV6-1A0A0B4J1U7 121 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 A0A1B0GV50 99 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 A0A1W2PQD3 144 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 WI2-2373I1.2A0A1W2PRP0 233 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 FABP5P3A8MUU1 101 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 INMT-MINDY4F8WBC2 141 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 M0R2Z0 102 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 SNAPC5O75971 98 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 KBTBD11O94819 623 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 CDRT1O95170 752 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 CRYBA1P05813 215 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 RPS4Y1P22090 263 aaKnown RBP4.13□□□□□ -1.75
DDB1-219ENST00000541513 SRIP30626 198 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 CRISP3P54108 245 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 TAS2R46P59540 309 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 GNG5P63218 68 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 TNFAIP6P98066 277 aaPredicted RBP4.13□□□□□ -1.75
DDB1-219ENST00000541513 ZNF181Q2M3W8 571 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 ZNF404Q494X3 552 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 C6orf99Q4VX62 202 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 Q5BKY6 102 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 COA6Q5JTJ3 125 aaKnown RBP4.13□□□□□ -1.75
DDB1-219ENST00000541513 FAM201AQ5SY85 155 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 SPINK14Q6IE38 97 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 DEFB125Q8N687 156 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 TMEM252Q8N6L7 170 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 ZFP62Q8NB50 900 aaPredicted RBP4.13□□□□□ -1.75
DDB1-219ENST00000541513 OR13C8Q8NGS7 320 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 NTN5Q8WTR8 489 aaPredicted RBP4.13□□□□□ -1.75
DDB1-219ENST00000541513 MBD3L1Q8WWY6 194 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 OR5P3Q8WZ94 311 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 LINC00052Q96N35 136 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 NRIP2Q9BQI9 281 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 GNB1LQ9BYB4 327 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 SMIM3Q9BZL3 60 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 SLC25A31Q9H0C2 315 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 PARP12Q9H0J9 701 aaKnown RBP4.13□□□□□ -1.75
DDB1-219ENST00000541513 IFI27L2Q9H2X8 130 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 BCL2L10Q9HD36 194 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 ACER3Q9NUN7 267 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 NAT8Q9UHE5 227 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 PYGO1Q9Y3Y4 419 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 DSPPQ9NZW4 1301 aa4.13□□□□□ -1.75
DDB1-219ENST00000541513 USP9XQ93008 2570 aaPredicted RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 NCOA6Q14686 2063 aaPredicted RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 UBR5O95071 2799 aaPredicted RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 SPTAN1Q13813 2472 aaKnown RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 A0A0G2JMM0 328 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 A0A1W2PPB8 328 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 A0A1W2PRS3 328 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 KIR3DP1A8MWS1 328 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 AIPO00170 330 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 T-ENOLP0DO92 83 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 BLVRBP30043 206 aaPredicted RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 NUDT2P50583 147 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 IFITM3Q01628 133 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 COL10A1Q03692 680 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 ZNF141Q15928 474 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 SLC25A30Q5SVS4 291 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 ZNF493Q6ZR52 646 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 GOLT1AQ6ZVE7 132 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 TMEM179BQ7Z7N9 219 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 C11orf53Q8IXP5 236 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 C10orf111Q8N326 155 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 ZIC4Q8N9L1 334 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 OR11H6Q8NGC7 330 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 RXFP4Q8TDU9 374 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 MGLLQ99685 303 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 PBDC1Q9BVG4 233 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 SAMD10Q9BYL1 202 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 JPT2Q9H910 190 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 SLC25A22Q9H936 323 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 EDA2RQ9HAV5 297 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 BOKQ9UMX3 212 aaPredicted RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 FLVCR1Q9Y5Y0 555 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 F11RQ9Y624 299 aaKnown RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 SPENQ96T58 3664 aaKnown RBP4.12□□□□□ -1.75
DDB1-219ENST00000541513 ALPK2Q86TB3 2170 aa4.12□□□□□ -1.75
DDB1-219ENST00000541513 TRAV8-3A0A0A6YYJ7 113 aa4.11□□□□□ -1.75
DDB1-219ENST00000541513 PLAC8L1A1L4L8 177 aa4.11□□□□□ -1.75
DDB1-219ENST00000541513 C5orf49A4QMS7 147 aa4.11□□□□□ -1.75
DDB1-219ENST00000541513 PINLYPA6NC86 204 aa4.11□□□□□ -1.75
DDB1-219ENST00000541513 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
DDB1-219ENST00000541513 PEX7O00628 323 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms