RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ANAPC10Q9UM13 185 aa12.42□□□□□ -0.42
SMARCA4-207ENST00000541122 FNDC10F2Z333 226 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 MRPL14Q6P1L8 145 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 TGFAP01135 160 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 OCIAD2Q56VL3 154 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 TMEM42Q69YG0 159 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 LCN12Q6JVE5 192 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 hDV102S1A0JD36 115 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 KIR3DL3Q8N743 410 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 POLR2AP24928 1970 aaKnown RBP12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 IGKV1-27A0A075B6S5 117 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 PLNP26678 52 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 KIR3DS1Q14943 382 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 NUP35Q8NFH5 326 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 OR13C6PQ8NH95 151 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 KIF26BQ2KJY2 2108 aa12.41□□□□□ -0.42
SMARCA4-207ENST00000541122 RHOGP84095 191 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 KLF17Q5JT82 389 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 A0A087X0K7 114 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 TMEM95Q3KNT9 176 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 DLX4Q92988 240 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 TMEM101Q96IK0 257 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 SCN2AQ99250 2005 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 PNRC2Q9NPJ4 139 aaKnown RBP12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 IFI27P40305 119 aaPredicted RBP12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 SPATA31B1PQ5VZV4 182 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 CST9LQ9H4G1 147 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 RFNGQ9Y644 331 aa12.4□□□□□ -0.42
SMARCA4-207ENST00000541122 EFEMP2O95967 443 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 RNASE1P07998 156 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 LAGE3Q14657 143 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 CCL21O00585 134 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 TDGF1P13385 188 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 IGHV1-2P23083 117 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 RNF182Q8N6D2 247 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 ERG28Q9UKR5 140 aa12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 SEPSECSQ9HD40 501 aaKnown RBP12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
SMARCA4-207ENST00000541122 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 RBMY1A1P0DJD3 496 aaKnown RBP12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 RBMY1CP0DJD4 496 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 ASCL4Q6XD76 172 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 GFRA4Q9GZZ7 299 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 CELA3AP09093 270 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 OR10W1Q8NGF6 305 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 HEATR5BQ9P2D3 2071 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 TCRAP04437 139 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 LHX2P50458 406 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 FOXF2Q12947 444 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 ATXN8Q156A1 80 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 TRAV21A0A0B4J279 112 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 IGHV4-39P01824 125 aa12.38□□□□□ -0.43
SMARCA4-207ENST00000541122 GHRHP01286 108 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 CNTFRP26992 372 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 ZIC4Q8N9L1 334 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 GTSF1LQ9H1H1 148 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 D6R8Y8 96 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 TRAV5A0A0B4J249 113 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 IGHV3-35A0A0C4DH35 117 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 NBR2O15453 112 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 NKX2-8O15522 239 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 IGKV1D-33P01593 117 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 IGKV1-33P01594 117 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 TRGV3P03979 118 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 APOBEC3AP31941 199 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 TMPRSS3P57727 454 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 TNFRSF14Q92956 283 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 TRGV9Q99603 122 aa12.37□□□□□ -0.43
SMARCA4-207ENST00000541122 GREB1Q4ZG55 1949 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 YPEL3P61236 119 aaPredicted RBP12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 CABIN1Q9Y6J0 2220 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 MYOFQ9NZM1 2061 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 IGLC2P0DOY2 106 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 IGLC3P0DOY3 106 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 DUX5Q96PT3 197 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 FAM71F2Q6NXP2 309 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 CLEC2AQ6UVW9 174 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 SIP14410 1827 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 GTSCR1Q86UQ5 136 aa12.36□□□□□ -0.43
SMARCA4-207ENST00000541122 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 SFTA2Q6UW10 78 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 TRBV7-9A0A0J9YWB2 115 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 CELA3BP08861 270 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 MAJINQ3KP22 176 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 EFNA2O43921 213 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 STPG1Q5TH74 334 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 JMJD8Q96S16 334 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
SMARCA4-207ENST00000541122 FOXH1O75593 365 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms