RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 IGLV11-55A0A075B6I3 123 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 NPIPB5A8MRT5 1133 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 H3BUX3 64 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 PAGE4O60829 102 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 NDUFB8O95169 186 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 AKR1C3P42330 323 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 UBE2G2P60604 165 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 KIAA0141Q14154 515 aaPredicted RBP9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 FAM78BQ5VT40 261 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 FAM90A2PQ658T7 463 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 SLC35E3Q7Z769 313 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 SVBPQ8N300 66 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 WFDC11Q8NEX6 87 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 RBM14Q96PK6 669 aaKnown RBP9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 TNFRSF19Q9NS68 423 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 C1RLQ9NZP8 487 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 ITPR2Q14571 2701 aa9.64□□□□□ -0.87
AP003559.1-201ENST00000540906 G3V318 75 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 OR5G3P0C626 314 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 IGLC1P0CG04 106 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 ATP5G3P48201 142 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 PMS2P11Q13670 270 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 ECSCRQ19T08 205 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 TIGITQ495A1 244 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 SPNS3Q6ZMD2 512 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 CLRN3Q8NCR9 226 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 VAX2Q9UIW0 290 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 FUT9Q9Y231 359 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 A6NDX4 124 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 F8W735 103 aaPredicted RBP9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 CORTO00230 105 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 OR2J3O76001 311 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 IGHV3-23P01764 117 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 NPPCP23582 126 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 GATA3P23771 443 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 GCHFRP30047 84 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 RHOBP62745 196 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 ETFRF1Q6IPR1 90 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 Q6ZS46 218 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 OR4X1Q8NH49 305 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 FAM167A-AS1Q96KT0 104 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 TRGV9Q99603 122 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 LINC00527Q9UJ94 153 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 MOB4Q9Y3A3 225 aa9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 YTHDF2Q9Y5A9 579 aaKnown RBP9.63□□□□□ -0.87
AP003559.1-201ENST00000540906 AKAP9Q99996 3911 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 DEFB112Q30KQ8 113 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 AKIRIN2Q53H80 203 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 SOHLH1Q5JUK2 328 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 TMEM88Q6PEY1 159 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 CBLN2Q8IUK8 224 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 SGMS2Q8NHU3 365 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 SLC25A2Q9BXI2 301 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 SMDT1Q9H4I9 107 aa9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
AP003559.1-201ENST00000540906 CYSRT1A8MQ03 144 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 CXorf1O96002 111 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 FSHBP01225 129 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 MEF2BQ02080 365 aaPredicted RBP9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 AWAT1Q58HT5 328 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 UNQ5815/PRO19632Q6UWF5 114 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 PUS1Q9Y606 427 aaKnown RBP eCLIP9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 ITPR3Q14573 2671 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 CCDC168Q8NDH2 2452 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 CLN5O75503 358 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 IFNA1P01562 189 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 OR4F5Q8NH21 305 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 FAM110DQ8TAY7 271 aaPredicted RBP9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 ZNF414Q96IQ9 312 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 OR4F4Q96R69 305 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 MANBALQ9NQG1 85 aa9.61□□□□□ -0.87
AP003559.1-201ENST00000540906 H3BQ15 152 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 J3QLI3 93 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 COX7A2P2O60397 106 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 SNAPINO95295 136 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 IGHV4-59P01825 116 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 SNRPCP09234 159 aaKnown RBP9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 PSG1P11464 419 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 ORM2P19652 201 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 PSMB3P49720 205 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 C19orf54Q5BKX5 351 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 PRSS57Q6UWY2 283 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 RBMS3Q6XE24 437 aaKnown RBP9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 OR51G1Q8NGK1 321 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 OR1B1Q8NGR6 318 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 DNAJC4Q9NNZ3 241 aa9.6□□□□□ -0.87
AP003559.1-201ENST00000540906 C11orf94C9JXX5 98 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 OR10J4P0C629 311 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 PYYP10082 97 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 SELENOTP62341 195 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 BLCAPP62952 87 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 C9orf152Q5JTZ5 239 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 C10orf113Q5VZT2 155 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 ZNF48Q96MX3 618 aaPredicted RBP9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 ZNF355PQ9NSJ1 428 aa9.59□□□□□ -0.87
AP003559.1-201ENST00000540906 TECRQ9NZ01 308 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms